DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LSRTPTPS
Uniprot ID:
C9J069
Source protein:
Apical junction component 1 homolog
Source gene:
AJM1
Class:
DEG_SCF_FBW7_1
Location:
235:242
E3 ligase:
FBXW7
DEGRON score:
0.9938
ASA_SCORE:
83.9625
COIL:
0.9566
CONS_SCORE:
0.7577
DSS_SCORE:
0.5131
HELIX:
0.0225
FCONS_SCORE:
1.0889
RIG_SCORE:
0.6322
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S236W
SIDM00614
Hepatocellular Carcinoma
GDSC
LSRTPTPS
DEG_SCF_FBW7_1
0.6763
p.S236W
JHH-7
liver
COSMIC
LSRTPTPS
DEG_SCF_FBW7_1
0.6763
p.T240A
SIDM00451
T-Lymphoblastic Leukemia
GDSC
LSRTPTPS
DEG_SCF_FBW7_1
0.6028
p.T240A
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
LSRTPTPS
DEG_SCF_FBW7_1
0.6028
Drug responses associated with AJM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSRTPTPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
C9J069
Apical junction component 1 homolog
DEG_SCF_FBW7_1
235:242
LSRTPTPS
FBXW7
0.9938
More...