DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSRTPVPS
Uniprot ID:
Q96F63
Source protein:
Coiled-coil domain-containing protein 97
Source gene:
CCDC97
Class:
DEG_SCF_FBW7_1
Location:
28:35
E3 ligase:
FBXW7
DEGRON score:
0.9167
ASA_SCORE:
90.1875
COIL:
0.9201
CONS_SCORE:
0.2296
DSS_SCORE:
0.6936
HELIX:
0.0185
FCONS_SCORE:
0.8793
RIG_SCORE:
0.6419
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R30W
TCGA-AX-A1CE
UCEC
TCGA
LSRTPVPS
DEG_SCF_FBW7_1
0.7523
p.R30W
DO42280
UCEC
ICGC
LSRTPVPS
DEG_SCF_FBW7_1
0.7523
p.Q38K
TCGA-BF-A1Q0
SKCM
TCGA
LSRTPVPS
DEG_SCF_FBW7_1
0.25
p.Q38K
DO47374
SKCM
ICGC
LSRTPVPS
DEG_SCF_FBW7_1
0.25
p.R30Q
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
LSRTPVPS
DEG_SCF_FBW7_1
0.6218
p.R30Q
NCI-H2172
lung
COSMIC
LSRTPVPS
DEG_SCF_FBW7_1
0.6218
p.D39N
SIDM00003
Melanoma
GDSC
LSRTPVPS
DEG_SCF_FBW7_1
0.2222
p.D39N
ACH-000884
Skin Cancer
CCLE
LSRTPVPS
DEG_SCF_FBW7_1
0.2222
p.D39N
ACH-002159
Skin Cancer
CCLE
LSRTPVPS
DEG_SCF_FBW7_1
0.2222
p.D39N
M14
skin
COSMIC
LSRTPVPS
DEG_SCF_FBW7_1
0.2222
p.G21V
ACH-001366
Neuroblastoma
CCLE
LSRTPVPS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with CCDC97 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSRTPVPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96F63
Coiled-coil domain-containing protein 97
DEG_SCF_FBW7_1
28:35
LSRTPVPS
FBXW7
0.9167
More...