DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSSTPHAS
Uniprot ID:
O60806
Source protein:
T-box transcription factor TBX19
Source gene:
TBX19
Class:
DEG_SCF_FBW7_1
Location:
328:335
E3 ligase:
FBXW7
DEGRON score:
0.9095
ASA_SCORE:
60.4875
COIL:
0.8453
CONS_SCORE:
0.4462
DSS_SCORE:
0.392
HELIX:
0.1255
FCONS_SCORE:
1.0011
RIG_SCORE:
0.653
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S329F
TCGA-BF-AAP2
SKCM
TCGA
LSSTPHAS
DEG_SCF_FBW7_1
0.6871
p.S329F
DO219466
SKCM
ICGC
LSSTPHAS
DEG_SCF_FBW7_1
0.6871
p.S335G
TCGA-BR-8060
STAD
TCGA
LSSTPHAS
DEG_SCF_FBW7_1
0.6993
p.S335G
DO38205
STAD
ICGC
LSSTPHAS
DEG_SCF_FBW7_1
0.6993
p.S327F
TCGA-FW-A3R5
SKCM
TCGA
LSSTPHAS
DEG_SCF_FBW7_1
0.3056
p.S327F
DO37406
SKCM
ICGC
LSSTPHAS
DEG_SCF_FBW7_1
0.3056
p.S335I
DO222404
BTCA
ICGC
LSSTPHAS
DEG_SCF_FBW7_1
0.7341
p.P332S
DO229502
SKCA
ICGC
LSSTPHAS
DEG_SCF_FBW7_1
0.6752
p.N343Y
SIDM00962
Chronic Myelogenous Leukemia
GDSC
LSSTPHAS
DEG_SCF_FBW7_1
0.1111
p.N343Y
BV-173
haematopoietic_and_lymphoid_tissue
COSMIC
LSSTPHAS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with TBX19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSSTPHAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60806
T-box transcription factor TBX19
DEG_SCF_FBW7_1
328:335
LSSTPHAS
FBXW7
0.9095
More...