DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSTPDGS
Uniprot ID:
Q9C040
Source protein:
Tripartite motif-containing protein 2
Source gene:
TRIM2
Class:
DEG_SCF_FBW7_1
Location:
369:375
E3 ligase:
FBXW7
DEGRON score:
0.9833
ASA_SCORE:
44.8286
COIL:
0.7173
CONS_SCORE:
0.3472
DSS_SCORE:
0.3756
HELIX:
0.0066
FCONS_SCORE:
1.0098
RIG_SCORE:
0.7268
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R363Q
TCGA-AG-A002
READ
TCGA
LSTPDGS
DEG_SCF_FBW7_1
0.1667
p.V373I
TCGA-AX-A2HA
UCEC
TCGA
LSTPDGS
DEG_SCF_FBW7_1
0.7076
p.E360K
TCGA-XK-AAIW
PRAD
TCGA
LSTPDGS
DEG_SCF_FBW7_1
0.0833
p.E368K
DO9002
COAD
ICGC
LSTPDGS
DEG_SCF_FBW7_1
0.3056
p.D373N
DO9956
COAD
ICGC
LSTPDGS
DEG_SCF_FBW7_1
0.5821
p.D373N
ACH-000985
Colon/Colorectal Cancer
CCLE
LSTPDGS
DEG_SCF_FBW7_1
0.5821
p.G374W
DO45450
LUSC
ICGC
LSTPDGS
DEG_SCF_FBW7_1
0.6714
p.A363T
DO46657
PAAD
ICGC
LSTPDGS
DEG_SCF_FBW7_1
0.1667
p.A367V
DO47873
STAD
ICGC
LSTPDGS
DEG_SCF_FBW7_1
0.2778
p.G374R
DO222328
STAD
ICGC
LSTPDGS
DEG_SCF_FBW7_1
0.6457
p.V376M
DO41361
UCEC
ICGC
LSTPDGS
DEG_SCF_FBW7_1
0.3056
p.T365S
SIDM00334
Endometrial Carcinoma
GDSC
LSTPDGS
DEG_SCF_FBW7_1
0.2222
p.G382C
SIDM01387
Small Cell Lung Carcinoma
GDSC
LSTPDGS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with TRIM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSTPDGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C040
Tripartite motif-containing protein 2
DEG_SCF_FBW7_1
369:375
LSTPDGS
FBXW7
0.9833
More...