DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSTPKTT
Uniprot ID:
Q8NDH2
Source protein:
Leucine-rich repeat transmembrane protein CCDC168
Source gene:
CCDC168
Class:
DEG_SCF_FBW7_1
Location:
1684:1690
E3 ligase:
FBXW7
DEGRON score:
0.9981
ASA_SCORE:
83.8857
COIL:
0.8347
CONS_SCORE:
0.5016
DSS_SCORE:
0.4651
HELIX:
0.0477
FCONS_SCORE:
1.3184
RIG_SCORE:
0.747
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1679H
TCGA-AP-A0LM
UCEC
TCGA
LSTPKTT
DEG_SCF_FBW7_1
0.1944
p.Q1679H
DO43306
UCEC
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.1944
p.E1698K
TCGA-AZ-4315
COAD
TCGA
LSTPKTT
DEG_SCF_FBW7_1
0.1111
p.E1698K
TCGA-F5-6814
READ
TCGA
LSTPKTT
DEG_SCF_FBW7_1
0.1111
p.E1698K
DO8842
COAD
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.1111
p.E1698K
DO228142
PBCA
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.1111
p.E1698K
DO36556
READ
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.1111
p.Q1681R
TCGA-DI-A1BU
UCEC
TCGA
LSTPKTT
DEG_SCF_FBW7_1
0.25
p.Q1681R
DO42023
UCEC
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.25
p.T1687N
TCGA-E6-A1LX
UCEC
TCGA
LSTPKTT
DEG_SCF_FBW7_1
0.7055
p.T1687N
DO41020
UCEC
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.7055
p.A1683T
DO228935
COCA
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.3056
p.S1696I
DO222884
COCA
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.1667
p.P1689L
DO223124
ESCA
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.7582
p.P1691L
DO231075
LUSC
ICGC
LSTPKTT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with CCDC168 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSTPKTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SCF_FBW7_1
1684:1690
LSTPKTT
FBXW7
0.9981
More...