DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSTPSGS
Uniprot ID:
Q8NFC6
Source protein:
Biorientation of chromosomes in cell division protein 1-like 1
Source gene:
BOD1L1
Class:
DEG_SCF_FBW7_1
Location:
1094:1100
E3 ligase:
FBXW7
DEGRON score:
0.9462
ASA_SCORE:
86.4143
COIL:
0.9324
CONS_SCORE:
0.4405
DSS_SCORE:
0.6629
HELIX:
0.0331
FCONS_SCORE:
0.9047
RIG_SCORE:
0.582
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1087K
TCGA-43-7656
LUSC
TCGA
LSTPSGS
DEG_SCF_FBW7_1
0.1389
p.E1087K
DO26424
LUSC
ICGC
LSTPSGS
DEG_SCF_FBW7_1
0.1389
p.G1109R
TCGA-73-4666
LUAD
TCGA
LSTPSGS
DEG_SCF_FBW7_1
0.0833
p.G1109R
DO26230
LUAD
ICGC
LSTPSGS
DEG_SCF_FBW7_1
0.0833
p.G1085V
TCGA-75-5125
LUAD
TCGA
LSTPSGS
DEG_SCF_FBW7_1
0.0833
p.G1085V
DO24477
LUAD
ICGC
LSTPSGS
DEG_SCF_FBW7_1
0.0833
p.Q1103H
TCGA-93-8067
LUAD
TCGA
LSTPSGS
DEG_SCF_FBW7_1
0.25
p.Q1103H
DO25113
LUAD
ICGC
LSTPSGS
DEG_SCF_FBW7_1
0.25
p.K1107N
TCGA-C8-A12Q
BRCA
TCGA
LSTPSGS
DEG_SCF_FBW7_1
0.25
p.K1107N
DO3182
BRCA
ICGC
LSTPSGS
DEG_SCF_FBW7_1
0.25
p.A1091E
DO229015
LICA
ICGC
LSTPSGS
DEG_SCF_FBW7_1
0.25
p.Q1103K
DO229022
LICA
ICGC
LSTPSGS
DEG_SCF_FBW7_1
0.25
p.S1108T
SIDM00934
Pancreatic Carcinoma
GDSC
LSTPSGS
DEG_SCF_FBW7_1
0.1111
p.A1091V
SIDM00217
Colorectal Carcinoma
GDSC
LSTPSGS
DEG_SCF_FBW7_1
0.25
p.A1091V
ACH-000999
Colon/Colorectal Cancer
CCLE
LSTPSGS
DEG_SCF_FBW7_1
0.25
p.A1091V
SNU-1040
large_intestine
COSMIC
LSTPSGS
DEG_SCF_FBW7_1
0.25
Drug responses associated with BOD1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSTPSGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SCF_FBW7_1
1094:1100
LSTPSGS
FBXW7
0.9462
More...