DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSTPWVS
Uniprot ID:
Q7Z6E9
Source protein:
E3 ubiquitin-protein ligase RBBP6
Source gene:
RBBP6
Class:
DEG_SCF_FBW7_1
Location:
611:617
E3 ligase:
FBXW7
DEGRON score:
0.9907
ASA_SCORE:
71.6857
COIL:
0.937
CONS_SCORE:
0.3232
DSS_SCORE:
0.5497
HELIX:
0.0283
FCONS_SCORE:
0.9679
RIG_SCORE:
0.6699
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W615C
TCGA-51-6867
LUSC
TCGA
LSTPWVS
DEG_SCF_FBW7_1
0.5889
p.W615C
DO26477
LUSC
ICGC
LSTPWVS
DEG_SCF_FBW7_1
0.5889
p.P602S
TCGA-D3-A2JF
SKCM
TCGA
LSTPWVS
DEG_SCF_FBW7_1
0.0833
p.P602S
DO38153
SKCM
ICGC
LSTPWVS
DEG_SCF_FBW7_1
0.0833
p.S617L
TCGA-GF-A3OT
SKCM
TCGA
LSTPWVS
DEG_SCF_FBW7_1
0.7667
p.S617L
DO47288
SKCM
ICGC
LSTPWVS
DEG_SCF_FBW7_1
0.7667
p.S617L
SIDM00298
Squamous Cell Lung Carcinoma
GDSC
LSTPWVS
DEG_SCF_FBW7_1
0.7667
p.S617L
ACH-000705
Lung Cancer
CCLE
LSTPWVS
DEG_SCF_FBW7_1
0.7667
p.S617L
ACH-001113
Lung Cancer
CCLE
LSTPWVS
DEG_SCF_FBW7_1
0.7667
p.T613A
TCGA-L5-A4OI
ESCA
TCGA
LSTPWVS
DEG_SCF_FBW7_1
0.7139
p.P605S
TCGA-QB-A6FS
SKCM
TCGA
LSTPWVS
DEG_SCF_FBW7_1
0.1667
p.P605S
DO48654
SKCM
ICGC
LSTPWVS
DEG_SCF_FBW7_1
0.1667
p.A623T
TCGA-SJ-A6ZI
UCEC
TCGA
LSTPWVS
DEG_SCF_FBW7_1
0.1667
p.A623T
DO219784
UCEC
ICGC
LSTPWVS
DEG_SCF_FBW7_1
0.1667
p.L611I
SIDM00845
Burkitt's Lymphoma
GDSC
LSTPWVS
DEG_SCF_FBW7_1
0.6063
p.L611I
SIDM00461
Acute Myeloid Leukemia
GDSC
LSTPWVS
DEG_SCF_FBW7_1
0.6063
p.L611I
SIDM01519
Head and Neck Carcinoma
GDSC
LSTPWVS
DEG_SCF_FBW7_1
0.6063
p.L611I
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
LSTPWVS
DEG_SCF_FBW7_1
0.6063
p.G603W
SIDM00143
Small Cell Lung Carcinoma
GDSC
LSTPWVS
DEG_SCF_FBW7_1
0.1111
p.G603W
ACH-000803
Lung Cancer
CCLE
LSTPWVS
DEG_SCF_FBW7_1
0.1111
p.G603W
COLO-668
lung
COSMIC
LSTPWVS
DEG_SCF_FBW7_1
0.1111
p.H624Y
SIDM00240
Cervical Carcinoma
GDSC
LSTPWVS
DEG_SCF_FBW7_1
0.1389
p.H624Y
OMC-1
cervix
COSMIC
LSTPWVS
DEG_SCF_FBW7_1
0.1389
p.R620C
HT-115
large_intestine
COSMIC
LSTPWVS
DEG_SCF_FBW7_1
0.25
Drug responses associated with RBBP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSTPWVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z6E9
E3 ubiquitin-protein ligase RBBP6
DEG_SCF_FBW7_1
611:617
LSTPWVS
FBXW7
0.9907
More...