DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSTPYSS
Uniprot ID:
Q8N5Q1
Source protein:
Golgi associated RAB2 interactor protein 5B
Source gene:
GARIN5B
Class:
DEG_SCF_FBW7_1
Location:
371:377
E3 ligase:
FBXW7
DEGRON score:
0.9116
ASA_SCORE:
85.9286
COIL:
0.9567
CONS_SCORE:
0.5037
DSS_SCORE:
0.539
HELIX:
0.0206
FCONS_SCORE:
0.9944
RIG_SCORE:
0.6872
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S377Y
TCGA-DD-A73G
LIHC
TCGA
LSTPYSS
DEG_SCF_FBW7_1
0.712
p.S377Y
DO48473
LIHC
ICGC
LSTPYSS
DEG_SCF_FBW7_1
0.712
p.A385T
DO51515
PACA
ICGC
LSTPYSS
DEG_SCF_FBW7_1
0.1111
p.P367L
DO231308
THCA
ICGC
LSTPYSS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with GARIN5B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSTPYSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5Q1
Golgi associated RAB2 interactor protein 5B
DEG_SCF_FBW7_1
371:377
LSTPYSS
FBXW7
0.9116
More...