DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSTTPFPS
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SCF_FBW7_1
Location:
640:647
E3 ligase:
FBXW7
DEGRON score:
0.9844
ASA_SCORE:
84.3125
COIL:
0.804
CONS_SCORE:
0.3519
DSS_SCORE:
0.4194
HELIX:
0.0181
FCONS_SCORE:
0.9354
RIG_SCORE:
0.7336
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T643I
TCGA-05-4382
LUAD
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.7078
p.T643I
DO24900
LUAD
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.7078
p.P644S
TCGA-21-1079
LUSC
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.6752
p.P644S
DO26846
LUSC
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.6752
p.T632K
TCGA-95-A4VP
LUAD
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.1111
p.T632K
DO51201
LUAD
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.1111
p.G637A
TCGA-AA-3666
COAD
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.25
p.G637A
DO9042
COAD
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.25
p.F635L
TCGA-AP-A054
UCEC
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.1944
p.F635L
DO42256
UCEC
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.1944
p.L636F
TCGA-AZ-4315
COAD
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.2222
p.L636F
DO8842
COAD
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.2222
p.R650C
TCGA-D3-A8GS
SKCM
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.25
p.R650C
DO51248
SKCM
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.25
p.E652K
TCGA-DF-A2KV
UCEC
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.1944
p.E652K
DO219771
UCEC
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.1944
p.E654K
TCGA-E6-A1LX
UCEC
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.1389
p.E654K
DO41020
UCEC
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.1389
p.E654K
KYM-1
soft_tissue
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.1389
p.E654K
GAK
skin
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.1389
p.E654K
SNU-423
liver
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.1389
p.E654K
MKN28
stomach
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.1389
p.F656L
TCGA-MI-A75C
LIHC
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.0833
p.F656L
DO49705
LIHC
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.0833
p.P646L
TCGA-ZF-A9RL
BLCA
TCGA
LSTTPFPS
DEG_SCF_FBW7_1
0.6471
p.P646L
DO219078
BLCA
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.6471
p.P657S
DO220907
MELA
ICGC
LSTTPFPS
DEG_SCF_FBW7_1
0.0556
p.R630G
SIDM01090
Colorectal Carcinoma
GDSC
LSTTPFPS
DEG_SCF_FBW7_1
0.0556
p.R630G
ACH-000943
Colon/Colorectal Cancer
CCLE
LSTTPFPS
DEG_SCF_FBW7_1
0.0556
p.R630G
RKO
large_intestine
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.0556
p.P644L
SIDM00855
Other Sarcomas
GDSC
LSTTPFPS
DEG_SCF_FBW7_1
0.7582
p.P644L
SIDM00125
Kidney Carcinoma
GDSC
LSTTPFPS
DEG_SCF_FBW7_1
0.7582
p.P644L
SIDM01083
Oral Cavity Carcinoma
GDSC
LSTTPFPS
DEG_SCF_FBW7_1
0.7582
p.D634N
ACH-000881
Skin Cancer
CCLE
LSTTPFPS
DEG_SCF_FBW7_1
0.1667
p.D634N
MEL-JUSO
skin
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.1667
p.R638I
SNU-81
large_intestine
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.2778
p.S647Y
SNU-81
large_intestine
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.8231
p.S655Y
CW-2
large_intestine
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.1111
p.E634D
HT-115
large_intestine
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.1667
p.G645E
HCT-15
large_intestine
COSMIC
LSTTPFPS
DEG_SCF_FBW7_1
0.7199
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSTTPFPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SCF_FBW7_1
640:647
LSTTPFPS
FBXW7
0.9844
More...