DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSTTPSES
Uniprot ID:
Q9NQX3
Source protein:
Gephyrin [Includes: Molybdopterin adenylyltransferase
Source gene:
GPHN
Class:
DEG_SCF_FBW7_1
Location:
263:270
E3 ligase:
FBXW7
DEGRON score:
0.9964
ASA_SCORE:
72.25
COIL:
0.7365
CONS_SCORE:
0.1503
DSS_SCORE:
0.641
HELIX:
0.0284
FCONS_SCORE:
1.009
RIG_SCORE:
0.6217
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G264C
TCGA-09-2044
OV
TCGA
LSTTPSES
DEG_SCF_FBW7_1
0.76
p.G264C
DO28923
OV
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.76
p.T273A
TCGA-AA-A01I
COAD
TCGA
LSTTPSES
DEG_SCF_FBW7_1
0.25
p.T273A
DO10510
COAD
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.25
p.R276W
TCGA-AP-A0LM
UCEC
TCGA
LSTTPSES
DEG_SCF_FBW7_1
0.6111
p.R276W
DO228532
MALY
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.6111
p.R276W
DO43306
UCEC
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.6111
p.E259K
TCGA-CV-7235
HNSC
TCGA
LSTTPSES
DEG_SCF_FBW7_1
0.2222
p.E259K
DO15102
HNSC
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.2222
p.P278S
TCGA-EB-A5SG
SKCM
TCGA
LSTTPSES
DEG_SCF_FBW7_1
0.1111
p.P278S
SIDM01768
Melanoma
GDSC
LSTTPSES
DEG_SCF_FBW7_1
0.1111
p.P278S
ACH-000899
Skin Cancer
CCLE
LSTTPSES
DEG_SCF_FBW7_1
0.1111
p.R276Q
TCGA-VQ-A8P2
STAD
TCGA
LSTTPSES
DEG_SCF_FBW7_1
0.6111
p.R276Q
DO222501
COCA
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.6111
p.R276Q
DO51761
STAD
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.6111
p.P261A
DO35128
PACA
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.2778
p.P263S
DO229502
SKCA
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.6752
p.N267S
DO47619
SKCM
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.7069
p.K265N
DO47869
STAD
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.6918
p.L269F
DO42033
UCEC
ICGC
LSTTPSES
DEG_SCF_FBW7_1
0.6981
p.H271N
SIDM00949
T-Cell Non-Hodgkin's Lymphoma
GDSC
LSTTPSES
DEG_SCF_FBW7_1
0.3056
p.H271N
ACH-000233
Lymphoma
CCLE
LSTTPSES
DEG_SCF_FBW7_1
0.3056
p.H271N
DEL
haematopoietic_and_lymphoid_tissue
COSMIC
LSTTPSES
DEG_SCF_FBW7_1
0.3056
p.Q274H
NCI-H250
lung
COSMIC
LSTTPSES
DEG_SCF_FBW7_1
0.2222
p.P267L
Mewo
skin
COSMIC
LSTTPSES
DEG_SCF_FBW7_1
0.7582
p.H253N
DEL
haematopoietic_and_lymphoid_tissue
COSMIC
LSTTPSES
DEG_SCF_FBW7_1
0.0556
p.P280L
Mewo
skin
COSMIC
LSTTPSES
DEG_SCF_FBW7_1
0.5
Drug responses associated with GPHN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSTTPSES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQX3
Gephyrin [Includes: Molybdopterin adenylyltransferase
DEG_SCF_FBW7_1
263:270
LSTTPSES
FBXW7
0.9964
More...