DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LSVFGD
Uniprot ID:
P17987
Source protein:
T-complex protein 1 subunit alpha
Source gene:
TCP1
Class:
LIG_APCC_ABBA_1
Location:
5:10
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9676
ASA_SCORE:
70.0667
COIL:
0.7623
CONS_SCORE:
0.3595
DSS_SCORE:
0.6542
HELIX:
0.1357
FCONS_SCORE:
0.9208
RIG_SCORE:
0.7327
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P4S
TCGA-AA-3811
COAD
TCGA
LSVFGD
LIG_APCC_ABBA_1
0.3056
p.P4S
DO7962
COAD
ICGC
LSVFGD
LIG_APCC_ABBA_1
0.3056
p.G9C
TCGA-D3-A3C6
SKCM
TCGA
LSVFGD
LIG_APCC_ABBA_1
0.6489
p.G9C
DO37507
SKCM
ICGC
LSVFGD
LIG_APCC_ABBA_1
0.6489
p.R18S
TCGA-EE-A2GT
SKCM
TCGA
LSVFGD
LIG_APCC_ABBA_1
0.1111
p.R18S
DO37946
SKCM
ICGC
LSVFGD
LIG_APCC_ABBA_1
0.1111
p.Q20E
DO229493
LAML
ICGC
LSVFGD
LIG_APCC_ABBA_1
0.0556
p.G9S
DO229135
LMS
ICGC
LSVFGD
LIG_APCC_ABBA_1
0.5882
p.I17M
SIDM00777
Colorectal Carcinoma
GDSC
LSVFGD
LIG_APCC_ABBA_1
0.1389
p.I17M
ACH-000360
Colon/Colorectal Cancer
CCLE
LSVFGD
LIG_APCC_ABBA_1
0.1389
p.I17M
NCI-H508
large_intestine
COSMIC
LSVFGD
LIG_APCC_ABBA_1
0.1389
Drug responses associated with TCP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSVFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17987
T-complex protein 1 subunit alpha
LIG_APCC_ABBA_1
5:10
LSVFGD
APC,CDC20,FZR1
0.9676
More...