DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LSVHPE
Uniprot ID:
Q8TBB5
Source protein:
Kelch domain-containing protein 4
Source gene:
KLHDC4
Class:
LIG_APCC_ABBA_1
Location:
69:74
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7822
ASA_SCORE:
36.0667
COIL:
0.3575
CONS_SCORE:
0.3871
DSS_SCORE:
0.3702
HELIX:
0.0282
FCONS_SCORE:
0.6738
RIG_SCORE:
0.7169
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S70L
TCGA-55-8089
LUAD
TCGA
LSVHPE
LIG_APCC_ABBA_1
0.6556
p.S70L
DO23690
LUAD
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.6556
p.P73S
TCGA-A2-A0D2
BRCA
TCGA
LSVHPE
LIG_APCC_ABBA_1
0.5641
p.P73S
TCGA-EE-A3AF
SKCM
TCGA
LSVHPE
LIG_APCC_ABBA_1
0.5641
p.P73S
DO6072
BRCA
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.5641
p.P73S
DO37911
SKCM
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.5641
p.E74D
TCGA-A5-A0G2
UCEC
TCGA
LSVHPE
LIG_APCC_ABBA_1
0.5647
p.E74D
DO41235
UCEC
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.5647
p.D76Y
TCGA-AX-A2HC
UCEC
TCGA
LSVHPE
LIG_APCC_ABBA_1
0.2778
p.D76Y
DO41572
UCEC
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.2778
p.S62T
TCGA-AZ-6601
COAD
TCGA
LSVHPE
LIG_APCC_ABBA_1
0.5833
p.S62T
DO8119
COAD
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.5833
p.P73L
TCGA-EE-A3AF
SKCM
TCGA
LSVHPE
LIG_APCC_ABBA_1
0.6471
p.P73L
DO37911
SKCM
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.6471
p.A67V
DO219010
BLCA
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.2778
p.A67V
DO223286
UCEC
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.2778
p.Q66K
DO229009
LICA
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.25
p.F81L
DO220851
MELA
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.1389
p.Q72E
DO32831
PACA
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.6744
p.G82W
DO42472
UCEC
ICGC
LSVHPE
LIG_APCC_ABBA_1
0.1111
p.L69V
SIDM01163
Non-Small Cell Lung Carcinoma
GDSC
LSVHPE
LIG_APCC_ABBA_1
0.5654
p.L69V
SIDM01036
Plasma Cell Myeloma
GDSC
LSVHPE
LIG_APCC_ABBA_1
0.5654
p.L69V
SIDM00753
Squamous Cell Lung Carcinoma
GDSC
LSVHPE
LIG_APCC_ABBA_1
0.5654
p.L69V
SIDM00404
B-Cell Non-Hodgkin's Lymphoma
GDSC
LSVHPE
LIG_APCC_ABBA_1
0.5654
p.L69V
SIDM01681
Non-Cancerous
GDSC
LSVHPE
LIG_APCC_ABBA_1
0.5654
p.L69V
SIDM01042
Breast Carcinoma
GDSC
LSVHPE
LIG_APCC_ABBA_1
0.5654
p.E77K
SIDM01699
Chondrosarcoma
GDSC
LSVHPE
LIG_APCC_ABBA_1
0.25
p.E77K
ACH-000224
Non-Cancerous
CCLE
LSVHPE
LIG_APCC_ABBA_1
0.25
p.V74F
SW1990
pancreas
COSMIC
LSVHPE
LIG_APCC_ABBA_1
0.7068
Drug responses associated with KLHDC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSVHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TBB5
Kelch domain-containing protein 4
LIG_APCC_ABBA_1
69:74
LSVHPE
APC,CDC20,FZR1
0.7822
More...