DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSVYKD
Uniprot ID:
P25205
Source protein:
DNA replication licensing factor MCM3
Source gene:
MCM3
Class:
LIG_APCC_ABBA_1
Location:
190:195
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8039
ASA_SCORE:
70.5
COIL:
0.6113
CONS_SCORE:
0.6701
DSS_SCORE:
0.4362
HELIX:
0.0182
FCONS_SCORE:
0.971
RIG_SCORE:
0.7685
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R183C
TCGA-AG-A002
READ
TCGA
LSVYKD
LIG_APCC_ABBA_1
0.1389
p.R183H
TCGA-AX-A2HC
UCEC
TCGA
LSVYKD
LIG_APCC_ABBA_1
0.1389
p.R183H
DO41572
UCEC
ICGC
LSVYKD
LIG_APCC_ABBA_1
0.1389
p.R183H
SIDM00447
B-Lymphoblastic Leukemia
GDSC
LSVYKD
LIG_APCC_ABBA_1
0.1389
p.R183H
REH
haematopoietic_and_lymphoid_tissue
COSMIC
LSVYKD
LIG_APCC_ABBA_1
0.1389
p.R188S
TCGA-BG-A222
UCEC
TCGA
LSVYKD
LIG_APCC_ABBA_1
0.2778
p.R202Q
TCGA-EO-A22R
UCEC
TCGA
LSVYKD
LIG_APCC_ABBA_1
0.1389
p.R188H
TCGA-F5-6814
READ
TCGA
LSVYKD
LIG_APCC_ABBA_1
0.2778
p.R188H
SIDM01051
Ovarian Carcinoma
GDSC
LSVYKD
LIG_APCC_ABBA_1
0.2778
p.R188H
EFO-27
ovary
COSMIC
LSVYKD
LIG_APCC_ABBA_1
0.2778
p.C193R
TCGA-HZ-7918
PAAD
TCGA
LSVYKD
LIG_APCC_ABBA_1
0.8301
p.V187I
DO230312
COCA
ICGC
LSVYKD
LIG_APCC_ABBA_1
0.25
p.V187I
SIDM01612
Endometrial Carcinoma
GDSC
LSVYKD
LIG_APCC_ABBA_1
0.25
p.L198I
DO14766
HNSC
ICGC
LSVYKD
LIG_APCC_ABBA_1
0.6944
p.G186D
DO43755
UCEC
ICGC
LSVYKD
LIG_APCC_ABBA_1
0.2222
p.A183V
DO41422
UCEC
ICGC
LSVYKD
LIG_APCC_ABBA_1
0.1389
p.P194H
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
LSVYKD
LIG_APCC_ABBA_1
0.7694
p.P194H
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LSVYKD
LIG_APCC_ABBA_1
0.7694
p.S189N
SIDM01263
T-Lymphoblastic Leukemia
GDSC
LSVYKD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with MCM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSVYKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25205
DNA replication licensing factor MCM3
LIG_APCC_ABBA_1
190:195
LSVYKD
APC,CDC20,FZR1
0.8039
More...