DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTLFPD
Uniprot ID:
Q6DKI7
Source protein:
Transmembrane protein PVRIG
Source gene:
PVRIG
Class:
LIG_APCC_ABBA_1
Location:
307:312
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9396
ASA_SCORE:
66.8
COIL:
0.767
CONS_SCORE:
1
DSS_SCORE:
0.7106
HELIX:
0.0343
FCONS_SCORE:
1
RIG_SCORE:
0.699
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P300T
TCGA-AO-A03T
BRCA
TCGA
LTLFPD
LIG_APCC_ABBA_1
0.1389
p.P300T
DO3215
BRCA
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.1389
p.P311T
TCGA-B5-A0JZ
UCEC
TCGA
LTLFPD
LIG_APCC_ABBA_1
0.5919
p.P311T
DO42761
UCEC
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.5919
p.P311S
TCGA-BF-AAOX
SKCM
TCGA
LTLFPD
LIG_APCC_ABBA_1
0.5641
p.P311S
DO223907
SKCM
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.5641
p.G306D
TCGA-FI-A2D0
UCEC
TCGA
LTLFPD
LIG_APCC_ABBA_1
0.3056
p.G306D
DO43891
UCEC
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.3056
p.G306D
ACH-001369
Ovarian Cancer
CCLE
LTLFPD
LIG_APCC_ABBA_1
0.3056
p.L309R
TCGA-MX-A5UJ
STAD
TCGA
LTLFPD
LIG_APCC_ABBA_1
0.8428
p.L309R
DO48547
STAD
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.8428
p.G306S
DO234246
ESAD
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.3056
p.G304C
DO229022
LICA
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.25
p.G304C
DO229031
LICA
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.25
p.G297V
DO229025
LICA
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.0556
p.R314Q
DO27937
ORCA
ICGC
LTLFPD
LIG_APCC_ABBA_1
0.2778
p.R299G
ACH-000947
Ovarian Cancer
CCLE
LTLFPD
LIG_APCC_ABBA_1
0.1111
p.R299G
OVK-18
ovary
COSMIC
LTLFPD
LIG_APCC_ABBA_1
0.1111
p.R317K
ACH-002446
Gastric Cancer
CCLE
LTLFPD
LIG_APCC_ABBA_1
0.1944
Drug responses associated with PVRIG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTLFPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6DKI7
Transmembrane protein PVRIG
LIG_APCC_ABBA_1
307:312
LTLFPD
APC,CDC20,FZR1
0.9396
More...