DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTLFSE
Uniprot ID:
P51800
Source protein:
Chloride channel protein ClC-Ka
Source gene:
CLCNKA
Class:
LIG_APCC_ABBA_1
Location:
633:638
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5513
ASA_SCORE:
62.5667
COIL:
0.6982
CONS_SCORE:
0.4324
DSS_SCORE:
0.2133
HELIX:
0.0627
FCONS_SCORE:
0.8647
RIG_SCORE:
0.8591
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q645H
TCGA-06-1802
GBM
TCGA
LTLFSE
LIG_APCC_ABBA_1
0.1389
p.G625C
TCGA-2G-AAF8
TGCT
TCGA
LTLFSE
LIG_APCC_ABBA_1
0.1111
p.N646H
TCGA-BR-8680
STAD
TCGA
LTLFSE
LIG_APCC_ABBA_1
0.1111
p.Q643H
TCGA-DU-6392
LGG
TCGA
LTLFSE
LIG_APCC_ABBA_1
0.1944
p.L647F
TCGA-WE-A8ZX
SKCM
TCGA
LTLFSE
LIG_APCC_ABBA_1
0.0833
p.L647F
SIDM00806
Osteosarcoma
GDSC
LTLFSE
LIG_APCC_ABBA_1
0.0833
p.L647F
HOS
bone
COSMIC
LTLFSE
LIG_APCC_ABBA_1
0.0833
p.Q644H
DO12100
GBM
ICGC
LTLFSE
LIG_APCC_ABBA_1
0.1667
p.W627C
DO16053
HNSC
ICGC
LTLFSE
LIG_APCC_ABBA_1
0.1667
p.R623W
DO231992
LICA
ICGC
LTLFSE
LIG_APCC_ABBA_1
0.0556
p.L640M
DO230530
LUSC
ICGC
LTLFSE
LIG_APCC_ABBA_1
0.2778
p.N645H
DO233550
PRAD
ICGC
LTLFSE
LIG_APCC_ABBA_1
0.1389
p.N645H
DO47769
STAD
ICGC
LTLFSE
LIG_APCC_ABBA_1
0.1389
p.L646F
DO51291
SKCM
ICGC
LTLFSE
LIG_APCC_ABBA_1
0.1111
p.L646F
HOS
bone
COSMIC
LTLFSE
LIG_APCC_ABBA_1
0.1111
p.A642T
DO38123
SKCM
ICGC
LTLFSE
LIG_APCC_ABBA_1
0.2222
p.P627R
SIDM00924
Other Solid Cancers
GDSC
LTLFSE
LIG_APCC_ABBA_1
0.1667
p.P627R
ACH-000867
Lung Cancer
CCLE
LTLFSE
LIG_APCC_ABBA_1
0.1667
p.P627R
ChaGo-K-1
lung
COSMIC
LTLFSE
LIG_APCC_ABBA_1
0.1667
p.R624K
SIDM00527
Colorectal Carcinoma
GDSC
LTLFSE
LIG_APCC_ABBA_1
0.0833
p.R624K
ACH-000935
Colon/Colorectal Cancer
CCLE
LTLFSE
LIG_APCC_ABBA_1
0.0833
p.R624K
MDST8
large_intestine
COSMIC
LTLFSE
LIG_APCC_ABBA_1
0.0833
p.R623K
MDST8
large_intestine
COSMIC
LTLFSE
LIG_APCC_ABBA_1
0.0556
p.P626R
ChaGo-K-1
lung
COSMIC
LTLFSE
LIG_APCC_ABBA_1
0.1389
p.E629Q
NCI-H1688
lung
COSMIC
LTLFSE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with CLCNKA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTLFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51800
Chloride channel protein ClC-Ka
LIG_APCC_ABBA_1
633:638
LTLFSE
APC,CDC20,FZR1
0.5513
More...