DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTLTPEWT
Uniprot ID:
Q9BRR0
Source protein:
Zinc finger protein with KRAB and SCAN domains 3
Source gene:
ZKSCAN3
Class:
DEG_SCF_FBW7_1
Location:
221:228
E3 ligase:
FBXW7
DEGRON score:
0.694
ASA_SCORE:
69.475
COIL:
0.5103
CONS_SCORE:
0.7395
DSS_SCORE:
0.4514
HELIX:
0.256
FCONS_SCORE:
0.8939
RIG_SCORE:
0.7941
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G235E
TCGA-AP-A0LM
UCEC
TCGA
LTLTPEWT
DEG_SCF_FBW7_1
0.1389
p.G235E
DO43306
UCEC
ICGC
LTLTPEWT
DEG_SCF_FBW7_1
0.1389
p.G212W
TCGA-DA-A1I1
SKCM
TCGA
LTLTPEWT
DEG_SCF_FBW7_1
0.0833
p.G212W
DO37966
SKCM
ICGC
LTLTPEWT
DEG_SCF_FBW7_1
0.0833
p.W227L
TCGA-FS-A1ZM
SKCM
TCGA
LTLTPEWT
DEG_SCF_FBW7_1
0.5904
p.W227L
DO37731
SKCM
ICGC
LTLTPEWT
DEG_SCF_FBW7_1
0.5904
p.S232L
TCGA-OR-A5JB
ACC
TCGA
LTLTPEWT
DEG_SCF_FBW7_1
0.2222
p.Q229H
DO8858
COAD
ICGC
LTLTPEWT
DEG_SCF_FBW7_1
0.3056
p.T228A
DO234219
ESAD
ICGC
LTLTPEWT
DEG_SCF_FBW7_1
0.825
p.G235V
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
LTLTPEWT
DEG_SCF_FBW7_1
0.1389
p.G235V
ACH-000924
Lung Cancer
CCLE
LTLTPEWT
DEG_SCF_FBW7_1
0.1389
p.G235V
NCI-H2172
lung
COSMIC
LTLTPEWT
DEG_SCF_FBW7_1
0.1389
p.D218A
SIDM01007
T-Lymphoblastic Leukemia
GDSC
LTLTPEWT
DEG_SCF_FBW7_1
0.25
p.D218A
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LTLTPEWT
DEG_SCF_FBW7_1
0.25
p.T222I
SIDM01055
Glioblastoma
GDSC
LTLTPEWT
DEG_SCF_FBW7_1
0.7078
p.T222I
GAMG
central_nervous_system
COSMIC
LTLTPEWT
DEG_SCF_FBW7_1
0.7078
p.V216M
SIDM00032
Bladder Carcinoma
GDSC
LTLTPEWT
DEG_SCF_FBW7_1
0.1944
p.V216M
ACH-000839
Bladder Cancer
CCLE
LTLTPEWT
DEG_SCF_FBW7_1
0.1944
p.V216M
SCaBER
urinary_tract
COSMIC
LTLTPEWT
DEG_SCF_FBW7_1
0.1944
Drug responses associated with ZKSCAN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTLTPEWT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BRR0
Zinc finger protein with KRAB and SCAN domains 3
DEG_SCF_FBW7_1
221:228
LTLTPEWT
FBXW7
0.694
More...