DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTLYPD
Uniprot ID:
Q9H7M6
Source protein:
Zinc finger SWIM domain-containing protein 4
Source gene:
ZSWIM4
Class:
LIG_APCC_ABBA_1
Location:
435:440
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6937
ASA_SCORE:
70.85
COIL:
0.7627
CONS_SCORE:
0.4028
DSS_SCORE:
0.3677
HELIX:
0.1943
FCONS_SCORE:
0.7794
RIG_SCORE:
0.7789
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E433D
TCGA-AO-A03M
BRCA
TCGA
LTLYPD
LIG_APCC_ABBA_1
0.2778
p.E433D
DO2216
BRCA
ICGC
LTLYPD
LIG_APCC_ABBA_1
0.2778
p.T434K
TCGA-BR-8680
STAD
TCGA
LTLYPD
LIG_APCC_ABBA_1
0.3056
p.E431Q
TCGA-E7-A7XN
BLCA
TCGA
LTLYPD
LIG_APCC_ABBA_1
0.2222
p.R429H
TCGA-EO-A22U
UCEC
TCGA
LTLYPD
LIG_APCC_ABBA_1
0.1667
p.R429H
DO43755
UCEC
ICGC
LTLYPD
LIG_APCC_ABBA_1
0.1667
p.P439S
TCGA-FS-A1ZW
SKCM
TCGA
LTLYPD
LIG_APCC_ABBA_1
0.5641
p.R429C
TCGA-YD-A89C
SKCM
TCGA
LTLYPD
LIG_APCC_ABBA_1
0.1667
p.R429C
DO219501
SKCM
ICGC
LTLYPD
LIG_APCC_ABBA_1
0.1667
p.R442C
DO50442
ESAD
ICGC
LTLYPD
LIG_APCC_ABBA_1
0.2778
p.M450T
DO46933
RECA
ICGC
LTLYPD
LIG_APCC_ABBA_1
0.0556
p.E444K
SIDM00683
Prostate Carcinoma
GDSC
LTLYPD
LIG_APCC_ABBA_1
0.2222
p.E444K
ACH-000977
lymph_node
CCLE
LTLYPD
LIG_APCC_ABBA_1
0.2222
p.E444K
LNCaP-Clone-FGC
prostate
COSMIC
LTLYPD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with ZSWIM4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTLYPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H7M6
Zinc finger SWIM domain-containing protein 4
LIG_APCC_ABBA_1
435:440
LTLYPD
APC,CDC20,FZR1
0.6937
More...