DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPANS
Uniprot ID:
Q13098
Source protein:
COP9 signalosome complex subunit 1
Source gene:
GPS1
Class:
DEG_SCF_FBW7_1
Location:
478:483
E3 ligase:
FBXW7
DEGRON score:
0.9914
ASA_SCORE:
81.75
COIL:
0.7925
CONS_SCORE:
0.3114
DSS_SCORE:
0.8004
HELIX:
0.152
FCONS_SCORE:
0.9879
RIG_SCORE:
0.6257
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R484H
TCGA-2W-A8YY
CESC
TCGA
LTPANS
DEG_SCF_FBW7_1
0.3056
p.R484H
DO223732
CESC
ICGC
LTPANS
DEG_SCF_FBW7_1
0.3056
p.R484H
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
LTPANS
DEG_SCF_FBW7_1
0.3056
p.R484H
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LTPANS
DEG_SCF_FBW7_1
0.3056
p.R492Q
TCGA-2W-A8YY
CESC
TCGA
LTPANS
DEG_SCF_FBW7_1
0.0833
p.R492Q
DO223732
CESC
ICGC
LTPANS
DEG_SCF_FBW7_1
0.0833
p.E473D
TCGA-AP-A1DV
UCEC
TCGA
LTPANS
DEG_SCF_FBW7_1
0.1944
p.E473D
DO43186
UCEC
ICGC
LTPANS
DEG_SCF_FBW7_1
0.1944
p.R485C
TCGA-BR-8368
STAD
TCGA
LTPANS
DEG_SCF_FBW7_1
0.7222
p.R485C
DO47981
STAD
ICGC
LTPANS
DEG_SCF_FBW7_1
0.7222
p.E473Q
TCGA-EK-A3GK
CESC
TCGA
LTPANS
DEG_SCF_FBW7_1
0.1944
p.E473Q
DO49964
CESC
ICGC
LTPANS
DEG_SCF_FBW7_1
0.1944
p.R492W
TCGA-NH-A5IV
COAD
TCGA
LTPANS
DEG_SCF_FBW7_1
0.0833
p.R492W
DO49095
COAD
ICGC
LTPANS
DEG_SCF_FBW7_1
0.0833
p.A486T
DO222765
COCA
ICGC
LTPANS
DEG_SCF_FBW7_1
0.25
p.A493V
DO233732
GACA
ICGC
LTPANS
DEG_SCF_FBW7_1
0.0556
p.M478I
DO229028
LICA
ICGC
LTPANS
DEG_SCF_FBW7_1
0.7618
p.R483H
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LTPANS
DEG_SCF_FBW7_1
0.8244
Drug responses associated with GPS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPANS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13098
COP9 signalosome complex subunit 1
DEG_SCF_FBW7_1
478:483
LTPANS
FBXW7
0.9914
More...