DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPASE
Uniprot ID:
Q9P1Y6
Source protein:
PHD and RING finger domain-containing protein 1
Source gene:
PHRF1
Class:
DEG_SCF_FBW7_2
Location:
1525:1530
E3 ligase:
FBXW7
DEGRON score:
0.9514
ASA_SCORE:
78.7333
COIL:
0.8967
CONS_SCORE:
0.3102
DSS_SCORE:
0.5015
HELIX:
0.0563
FCONS_SCORE:
0.9874
RIG_SCORE:
0.6715
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1522T
TCGA-AP-A0LM
UCEC
TCGA
LTPASE
DEG_SCF_FBW7_2
0.25
p.A1522T
TCGA-SW-A7EA
STAD
TCGA
LTPASE
DEG_SCF_FBW7_2
0.25
p.P1519T
TCGA-ER-A19T
SKCM
TCGA
LTPASE
DEG_SCF_FBW7_2
0.1667
p.P1518S
DO7442
CLLE
ICGC
LTPASE
DEG_SCF_FBW7_2
0.1389
p.P1529L
DO231072
LUSC
ICGC
LTPASE
DEG_SCF_FBW7_2
0.7582
p.P1518T
DO51251
SKCM
ICGC
LTPASE
DEG_SCF_FBW7_2
0.1389
p.A1521T
DO51749
STAD
ICGC
LTPASE
DEG_SCF_FBW7_2
0.2222
p.A1521T
DO43306
UCEC
ICGC
LTPASE
DEG_SCF_FBW7_2
0.2222
p.A1524P
HCC2998
large_intestine
COSMIC
LTPASE
DEG_SCF_FBW7_2
0.3056
p.A1526P
HCC2998
large_intestine
COSMIC
LTPASE
DEG_SCF_FBW7_2
0.7503
p.A1527P
HCC2998
large_intestine
COSMIC
LTPASE
DEG_SCF_FBW7_2
0.7503
p.A1528P
HCC2998
large_intestine
COSMIC
LTPASE
DEG_SCF_FBW7_2
0.6392
Drug responses associated with PHRF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPASE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P1Y6
PHD and RING finger domain-containing protein 1
DEG_SCF_FBW7_2
1525:1530
LTPASE
FBXW7
0.9514
More...