DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPCTE
Uniprot ID:
Q66K89
Source protein:
Transcription factor E4F1
Source gene:
E4F1
Class:
DEG_SCF_FBW7_2
Location:
270:275
E3 ligase:
FBXW7
DEGRON score:
0.905
ASA_SCORE:
60.75
COIL:
0.8138
CONS_SCORE:
0.9661
DSS_SCORE:
0.262
HELIX:
0.1605
FCONS_SCORE:
1.1425
RIG_SCORE:
0.8093
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R278C
TCGA-AP-A1DK
UCEC
TCGA
LTPCTE
DEG_SCF_FBW7_2
0.25
p.R278C
DO42033
UCEC
ICGC
LTPCTE
DEG_SCF_FBW7_2
0.25
p.S260L
TCGA-AX-A3G9
UCEC
TCGA
LTPCTE
DEG_SCF_FBW7_2
0.5
p.S260L
DO41241
UCEC
ICGC
LTPCTE
DEG_SCF_FBW7_2
0.5
p.T271I
TCGA-D1-A103
UCEC
TCGA
LTPCTE
DEG_SCF_FBW7_2
0.7078
p.T271I
DO42312
UCEC
ICGC
LTPCTE
DEG_SCF_FBW7_2
0.7078
p.S269P
TCGA-VQ-A8P2
STAD
TCGA
LTPCTE
DEG_SCF_FBW7_2
0.75
p.S269P
DO51761
STAD
ICGC
LTPCTE
DEG_SCF_FBW7_2
0.75
p.I277M
DO225215
BRCA
ICGC
LTPCTE
DEG_SCF_FBW7_2
0.2778
p.I277M
DO227836
BRCA
ICGC
LTPCTE
DEG_SCF_FBW7_2
0.2778
p.C273Y
DO234219
ESAD
ICGC
LTPCTE
DEG_SCF_FBW7_2
0.5976
p.A262T
SIDM00364
B-Lymphoblastic Leukemia
GDSC
LTPCTE
DEG_SCF_FBW7_2
0.1111
p.A262T
ACH-002059
Leukemia
CCLE
LTPCTE
DEG_SCF_FBW7_2
0.1111
p.A262T
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
LTPCTE
DEG_SCF_FBW7_2
0.1111
p.R278H
SIDM00379
Glioma
GDSC
LTPCTE
DEG_SCF_FBW7_2
0.25
p.R278H
ACH-001991
Primary
CCLE
LTPCTE
DEG_SCF_FBW7_2
0.25
p.R278H
ACH-002304
Brain Cancer
CCLE
LTPCTE
DEG_SCF_FBW7_2
0.25
p.R278H
SK-MG-1
central_nervous_system
COSMIC
LTPCTE
DEG_SCF_FBW7_2
0.25
p.D284G
SIDM00217
Colorectal Carcinoma
GDSC
LTPCTE
DEG_SCF_FBW7_2
0.0833
p.D284G
ACH-000999
Colon/Colorectal Cancer
CCLE
LTPCTE
DEG_SCF_FBW7_2
0.0833
p.D284G
SNU-1040
large_intestine
COSMIC
LTPCTE
DEG_SCF_FBW7_2
0.0833
Drug responses associated with E4F1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPCTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q66K89
Transcription factor E4F1
DEG_SCF_FBW7_2
270:275
LTPCTE
FBXW7
0.905
More...