DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPDEE
Uniprot ID:
O75113
Source protein:
NEDD4-binding protein 1
Source gene:
N4BP1
Class:
DEG_SCF_FBW7_2
Location:
269:274
E3 ligase:
FBXW7
DEGRON score:
0.9973
ASA_SCORE:
84.0167
COIL:
0.6728
CONS_SCORE:
0.3739
DSS_SCORE:
0.4695
HELIX:
0.3035
FCONS_SCORE:
1.0613
RIG_SCORE:
0.7309
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R280T
TCGA-BA-A6DA
HNSC
TCGA
LTPDEE
DEG_SCF_FBW7_2
0.1667
p.R280T
DO44448
HNSC
ICGC
LTPDEE
DEG_SCF_FBW7_2
0.1667
p.R280I
TCGA-D1-A17Q
UCEC
TCGA
LTPDEE
DEG_SCF_FBW7_2
0.1667
p.R280I
DO41903
UCEC
ICGC
LTPDEE
DEG_SCF_FBW7_2
0.1667
p.S277P
TCGA-DI-A1BU
UCEC
TCGA
LTPDEE
DEG_SCF_FBW7_2
0.25
p.S277P
DO42023
UCEC
ICGC
LTPDEE
DEG_SCF_FBW7_2
0.25
p.R280S
DO222762
COCA
ICGC
LTPDEE
DEG_SCF_FBW7_2
0.1667
p.I266V
DO32936
PACA
ICGC
LTPDEE
DEG_SCF_FBW7_2
0.25
p.T270A
SIDM01218
Other Solid Cancers
GDSC
LTPDEE
DEG_SCF_FBW7_2
0.825
p.T270A
ACH-001530
Endometrial/Uterine Cancer
CCLE
LTPDEE
DEG_SCF_FBW7_2
0.825
p.T270A
JEG-3
placenta
COSMIC
LTPDEE
DEG_SCF_FBW7_2
0.825
Drug responses associated with N4BP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPDEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75113
NEDD4-binding protein 1
DEG_SCF_FBW7_2
269:274
LTPDEE
FBXW7
0.9973
More...