DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPDQE
Uniprot ID:
P25054
Source protein:
Adenomatous polyposis coli protein
Source gene:
APC
Class:
DEG_SCF_FBW7_2
Location:
2150:2155
E3 ligase:
FBXW7
DEGRON score:
0.9046
ASA_SCORE:
95.9333
COIL:
0.7363
CONS_SCORE:
0.4031
DSS_SCORE:
0.6111
HELIX:
0.2548
FCONS_SCORE:
0.9698
RIG_SCORE:
0.6683
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L2144M
TCGA-05-4396
LUAD
TCGA
LTPDQE
DEG_SCF_FBW7_2
0.1667
p.L2144M
DO23838
LUAD
ICGC
LTPDQE
DEG_SCF_FBW7_2
0.1667
p.Q2154E
TCGA-85-8666
LUSC
TCGA
LTPDQE
DEG_SCF_FBW7_2
0.5633
p.Q2154E
DO45547
LUSC
ICGC
LTPDQE
DEG_SCF_FBW7_2
0.5633
p.G2145R
TCGA-BH-A0HF
BRCA
TCGA
LTPDQE
DEG_SCF_FBW7_2
0.1944
p.G2145R
DO1749
BRCA
ICGC
LTPDQE
DEG_SCF_FBW7_2
0.1944
p.Q2154P
DO232761
PBCA
ICGC
LTPDQE
DEG_SCF_FBW7_2
0.5924
p.G2145V
SIDM00455
Pancreatic Carcinoma
GDSC
LTPDQE
DEG_SCF_FBW7_2
0.1944
p.G2145V
ACH-000599
Pancreatic Cancer
CCLE
LTPDQE
DEG_SCF_FBW7_2
0.1944
p.G2145V
PA-TU-8902
pancreas
COSMIC
LTPDQE
DEG_SCF_FBW7_2
0.1944
p.L2150V
SIDM00927
Small Cell Lung Carcinoma
GDSC
LTPDQE
DEG_SCF_FBW7_2
0.5654
p.L2150V
ACH-000871
Lung Cancer
CCLE
LTPDQE
DEG_SCF_FBW7_2
0.5654
p.L2150V
NCI-H510A
lung
COSMIC
LTPDQE
DEG_SCF_FBW7_2
0.5654
Drug responses associated with APC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPDQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25054
Adenomatous polyposis coli protein
DEG_SCF_FBW7_2
2150:2155
LTPDQE
FBXW7
0.9046
More...