DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPDRE
Uniprot ID:
Q8TBN0
Source protein:
Guanine nucleotide exchange factor for Rab-3A
Source gene:
RAB3IL1
Class:
DEG_SCF_FBW7_2
Location:
211:216
E3 ligase:
FBXW7
DEGRON score:
0.7112
ASA_SCORE:
84.9667
COIL:
0.7293
CONS_SCORE:
0.4818
DSS_SCORE:
0.4563
HELIX:
0.1083
FCONS_SCORE:
1.0463
RIG_SCORE:
0.7335
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A206T
TCGA-AA-A010
COAD
TCGA
LTPDRE
DEG_SCF_FBW7_2
0.1944
p.V220L
TCGA-AP-A1DV
UCEC
TCGA
LTPDRE
DEG_SCF_FBW7_2
0.2222
p.V220L
DO43186
UCEC
ICGC
LTPDRE
DEG_SCF_FBW7_2
0.2222
p.A207V
DO228963
LICA
ICGC
LTPDRE
DEG_SCF_FBW7_2
0.2222
p.A207V
ACH-000982
Colon/Colorectal Cancer
CCLE
LTPDRE
DEG_SCF_FBW7_2
0.2222
p.A207V
ACH-001345
Colon/Colorectal Cancer
CCLE
LTPDRE
DEG_SCF_FBW7_2
0.2222
p.T212N
DO229015
LICA
ICGC
LTPDRE
DEG_SCF_FBW7_2
0.8166
p.D214E
DO229015
LICA
ICGC
LTPDRE
DEG_SCF_FBW7_2
0.5647
p.A206S
DO229229
THCA
ICGC
LTPDRE
DEG_SCF_FBW7_2
0.1944
p.P205R
SIDM01261
Breast Carcinoma
GDSC
LTPDRE
DEG_SCF_FBW7_2
0.1667
p.A202T
SIDM00613
Glioblastoma
GDSC
LTPDRE
DEG_SCF_FBW7_2
0.0833
p.A202T
ACH-000231
Brain Cancer
CCLE
LTPDRE
DEG_SCF_FBW7_2
0.0833
p.A202T
ACH-000967
Colon/Colorectal Cancer
CCLE
LTPDRE
DEG_SCF_FBW7_2
0.0833
Drug responses associated with RAB3IL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPDRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TBN0
Guanine nucleotide exchange factor for Rab-3A
DEG_SCF_FBW7_2
211:216
LTPDRE
FBXW7
0.7112
More...