DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPEDT
Uniprot ID:
Q9BQS8
Source protein:
FYVE and coiled-coil domain-containing protein 1
Source gene:
FYCO1
Class:
DEG_SCF_FBW7_1
Location:
1322:1327
E3 ligase:
FBXW7
DEGRON score:
0.9888
ASA_SCORE:
86.35
COIL:
0.8248
CONS_SCORE:
0.4413
DSS_SCORE:
0.7945
HELIX:
0.1415
FCONS_SCORE:
1.0826
RIG_SCORE:
0.6715
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1321L
TCGA-AJ-A3EK
UCEC
TCGA
LTPEDT
DEG_SCF_FBW7_1
0.3056
p.V1332M
TCGA-CA-6719
COAD
TCGA
LTPEDT
DEG_SCF_FBW7_1
0.1944
p.V1332M
SIDM00952
B-Cell Non-Hodgkin's Lymphoma
GDSC
LTPEDT
DEG_SCF_FBW7_1
0.1944
p.V1332M
ACH-002220
Lymphoma
CCLE
LTPEDT
DEG_SCF_FBW7_1
0.1944
p.V1332M
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
LTPEDT
DEG_SCF_FBW7_1
0.1944
p.E1330G
DO233760
GACA
ICGC
LTPEDT
DEG_SCF_FBW7_1
0.25
p.A1312V
SIDM01175
Other Sarcomas
GDSC
LTPEDT
DEG_SCF_FBW7_1
0.0556
p.A1312V
ACH-002309
Sarcoma
CCLE
LTPEDT
DEG_SCF_FBW7_1
0.0556
p.A1312V
SW684
soft_tissue
COSMIC
LTPEDT
DEG_SCF_FBW7_1
0.0556
p.T1320A
SIDM00451
T-Lymphoblastic Leukemia
GDSC
LTPEDT
DEG_SCF_FBW7_1
0.2778
p.T1320A
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
LTPEDT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with FYCO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPEDT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BQS8
FYVE and coiled-coil domain-containing protein 1
DEG_SCF_FBW7_1
1322:1327
LTPEDT
FBXW7
0.9888
More...