DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPGFT
Uniprot ID:
P51816
Source protein:
AF4/FMR2 family member 2
Source gene:
AFF2
Class:
DEG_SCF_FBW7_1
Location:
396:401
E3 ligase:
FBXW7
DEGRON score:
0.9957
ASA_SCORE:
75.1833
COIL:
0.8945
CONS_SCORE:
0.4535
DSS_SCORE:
0.5895
HELIX:
0.0538
FCONS_SCORE:
1.1623
RIG_SCORE:
0.7234
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P389S
TCGA-38-4629
LUAD
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.1389
p.P389S
DO23771
LUAD
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.1389
p.P398L
TCGA-44-6779
LUAD
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.7582
p.Q391H
TCGA-A6-3809
COAD
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.1944
p.Q391H
TCGA-B5-A3FA
UCEC
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.1944
p.Q391H
DO8722
COAD
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.1944
p.Q391H
DO52402
UCEC
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.1944
p.D407N
TCGA-C5-A8XK
CESC
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.1667
p.P398S
TCGA-KL-8338
KICH
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.6752
p.P408T
TCGA-N6-A4VD
UCS
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.1389
p.E392D
TCGA-O1-A52J
LUAD
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.2222
p.S387F
TCGA-YD-A89C
SKCM
TCGA
LTPGFT
DEG_SCF_FBW7_1
0.0833
p.S387F
DO219501
SKCM
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.0833
p.L397V
DO228290
BRCA
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.6765
p.E398D
DO51732
COAD
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.6758
p.K401N
DO8336
COAD
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.6918
p.L403V
DO233848
GACA
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.2778
p.L403V
DO38507
STAD
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.2778
p.D396G
DO12220
GBM
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.7198
p.E398V
DO52318
LIHC
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.7693
p.P399H
DO51193
LUAD
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.7694
p.P399H
LS-411N
large_intestine
COSMIC
LTPGFT
DEG_SCF_FBW7_1
0.7694
p.T404I
DO42673
UCEC
ICGC
LTPGFT
DEG_SCF_FBW7_1
0.6944
p.T401I
SIDM01986
Non-Small Cell Lung Carcinoma
GDSC
LTPGFT
DEG_SCF_FBW7_1
0.8189
p.G390R
SIDM00003
Melanoma
GDSC
LTPGFT
DEG_SCF_FBW7_1
0.1667
p.G390R
ACH-000884
Skin Cancer
CCLE
LTPGFT
DEG_SCF_FBW7_1
0.1667
p.G390R
ACH-002159
Skin Cancer
CCLE
LTPGFT
DEG_SCF_FBW7_1
0.1667
p.G390R
M14
skin
COSMIC
LTPGFT
DEG_SCF_FBW7_1
0.1667
p.S396G
KM12
large_intestine
COSMIC
LTPGFT
DEG_SCF_FBW7_1
0.6993
p.S398G
KM12
large_intestine
COSMIC
LTPGFT
DEG_SCF_FBW7_1
0.6993
p.P403H
LS-411N
large_intestine
COSMIC
LTPGFT
DEG_SCF_FBW7_1
0.2778
p.S392G
KM12
large_intestine
COSMIC
LTPGFT
DEG_SCF_FBW7_1
0.2222
p.S406N
GP5d
large_intestine
COSMIC
LTPGFT
DEG_SCF_FBW7_1
0.1944
p.P405H
LS-411N
large_intestine
COSMIC
LTPGFT
DEG_SCF_FBW7_1
0.2222
Drug responses associated with AFF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPGFT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51816
AF4/FMR2 family member 2
DEG_SCF_FBW7_1
396:401
LTPGFT
FBXW7
0.9957
More...