DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LTPGSS
Uniprot ID:
Q9C0C6
Source protein:
CLOCK-interacting pacemaker
Source gene:
CIPC
Class:
DEG_SCF_FBW7_1
Location:
379:384
E3 ligase:
FBXW7
DEGRON score:
0.9008
ASA_SCORE:
67.9167
COIL:
0.8613
CONS_SCORE:
0.5207
DSS_SCORE:
0.4688
HELIX:
0.1065
FCONS_SCORE:
0.8013
RIG_SCORE:
0.6
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G387D
TCGA-AB-2808
LAML
TCGA
LTPGSS
DEG_SCF_FBW7_1
0.25
p.L379F
TCGA-AD-6895
COAD
TCGA
LTPGSS
DEG_SCF_FBW7_1
0.6981
p.L379F
TCGA-GF-A6C9
SKCM
TCGA
LTPGSS
DEG_SCF_FBW7_1
0.6981
p.G382W
SIDM01095
Rhabdomyosarcoma
GDSC
LTPGSS
DEG_SCF_FBW7_1
0.6714
p.G382W
SJRH30
soft_tissue
COSMIC
LTPGSS
DEG_SCF_FBW7_1
0.6714
p.P381R
SIDM00895
B-Cell Non-Hodgkin's Lymphoma
GDSC
LTPGSS
DEG_SCF_FBW7_1
0.7512
p.P381R
BC-3
haematopoietic_and_lymphoid_tissue
COSMIC
LTPGSS
DEG_SCF_FBW7_1
0.7512
p.T380I
SIDM00801
Melanoma
GDSC
LTPGSS
DEG_SCF_FBW7_1
0.7078
p.T380I
A101D
skin
COSMIC
LTPGSS
DEG_SCF_FBW7_1
0.7078
Drug responses associated with CIPC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPGSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C0C6
CLOCK-interacting pacemaker
DEG_SCF_FBW7_1
379:384
LTPGSS
FBXW7
0.9008
More...