DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPGYS
Uniprot ID:
A3KN83
Source protein:
Protein strawberry notch homolog 1
Source gene:
SBNO1
Class:
DEG_SCF_FBW7_1
Location:
1165:1170
E3 ligase:
FBXW7
DEGRON score:
0.9814
ASA_SCORE:
56.6667
COIL:
0.8115
CONS_SCORE:
0.3193
DSS_SCORE:
0.2909
HELIX:
0.0438
FCONS_SCORE:
0.8571
RIG_SCORE:
0.7266
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1157Q
TCGA-A5-A0GB
UCEC
TCGA
LTPGYS
DEG_SCF_FBW7_1
0.1111
p.R1157Q
DO41434
UCEC
ICGC
LTPGYS
DEG_SCF_FBW7_1
0.1111
p.L1165M
TCGA-BS-A0UV
UCEC
TCGA
LTPGYS
DEG_SCF_FBW7_1
0.5999
p.L1165M
DO229026
LICA
ICGC
LTPGYS
DEG_SCF_FBW7_1
0.5999
p.L1165M
DO42793
UCEC
ICGC
LTPGYS
DEG_SCF_FBW7_1
0.5999
p.P1167L
TCGA-D1-A17U
UCEC
TCGA
LTPGYS
DEG_SCF_FBW7_1
0.7582
p.P1167L
DO41887
UCEC
ICGC
LTPGYS
DEG_SCF_FBW7_1
0.7582
p.P1167R
DO222483
BTCA
ICGC
LTPGYS
DEG_SCF_FBW7_1
0.7512
p.S1159N
SIDM00740
Squamous Cell Lung Carcinoma
GDSC
LTPGYS
DEG_SCF_FBW7_1
0.1667
p.K1163E
SIDM01611
Endometrial Carcinoma
GDSC
LTPGYS
DEG_SCF_FBW7_1
0.2778
p.K1163E
ACH-000996
Endometrial/Uterine Cancer
CCLE
LTPGYS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with SBNO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPGYS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A3KN83
Protein strawberry notch homolog 1
DEG_SCF_FBW7_1
1165:1170
LTPGYS
FBXW7
0.9814
More...