DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPLTS
Uniprot ID:
O95486
Source protein:
Protein transport protein Sec24A
Source gene:
SEC24A
Class:
DEG_SCF_FBW7_1
Location:
224:229
E3 ligase:
FBXW7
DEGRON score:
0.9917
ASA_SCORE:
88.5167
COIL:
0.9563
CONS_SCORE:
0.2281
DSS_SCORE:
0.6146
HELIX:
0.0287
FCONS_SCORE:
0.755
RIG_SCORE:
0.7027
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F239Y
TCGA-CZ-5468
KIRC
TCGA
LTPLTS
DEG_SCF_FBW7_1
0.0556
p.F239Y
DO18332
KIRC
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.0556
p.Q236K
TCGA-D3-A2JP
SKCM
TCGA
LTPLTS
DEG_SCF_FBW7_1
0.1389
p.Q236K
DO47407
SKCM
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.1389
p.P218Q
TCGA-D9-A6E9
SKCM
TCGA
LTPLTS
DEG_SCF_FBW7_1
0.1667
p.P218Q
DO50289
SKCM
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.1667
p.P220S
TCGA-EE-A3AH
SKCM
TCGA
LTPLTS
DEG_SCF_FBW7_1
0.2222
p.P220S
DO222635
MELA
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.2222
p.P220S
DO37443
SKCM
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.2222
p.A223V
TCGA-F7-A624
HNSC
TCGA
LTPLTS
DEG_SCF_FBW7_1
0.3056
p.A223V
DO44440
HNSC
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.3056
p.A223V
DO50962
LICA
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.3056
p.R222M
TCGA-GN-A26C
SKCM
TCGA
LTPLTS
DEG_SCF_FBW7_1
0.2778
p.R222M
DO37782
SKCM
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.2778
p.Q236R
TCGA-QS-A5YR
UCEC
TCGA
LTPLTS
DEG_SCF_FBW7_1
0.1389
p.Q236R
DO50081
UCEC
ICGC
LTPLTS
DEG_SCF_FBW7_1
0.1389
p.P220Q
SIDM01117
Small Cell Lung Carcinoma
GDSC
LTPLTS
DEG_SCF_FBW7_1
0.2222
p.L238V
SIDM00910
Neuroblastoma
GDSC
LTPLTS
DEG_SCF_FBW7_1
0.0833
p.L238V
CHP-212
autonomic_ganglia
COSMIC
LTPLTS
DEG_SCF_FBW7_1
0.0833
p.L224P
ACH-000391
Bone Cancer
CCLE
LTPLTS
DEG_SCF_FBW7_1
0.6471
p.L224P
MHH-ES-1
bone
COSMIC
LTPLTS
DEG_SCF_FBW7_1
0.6471
Drug responses associated with SEC24A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPLTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95486
Protein transport protein Sec24A
DEG_SCF_FBW7_1
224:229
LTPLTS
FBXW7
0.9917
More...