DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPNGT
Uniprot ID:
Q9NT99
Source protein:
Leucine-rich repeat-containing protein 4B
Source gene:
LRRC4B
Class:
DEG_SCF_FBW7_1
Location:
397:402
E3 ligase:
FBXW7
DEGRON score:
0.9814
ASA_SCORE:
55.8667
COIL:
0.768
CONS_SCORE:
0.7251
DSS_SCORE:
0.3379
HELIX:
0.004
FCONS_SCORE:
1.194
RIG_SCORE:
0.7883
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M391K
TCGA-44-7661
LUAD
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.1667
p.M391K
DO23602
LUAD
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.1667
p.V394G
TCGA-60-2724
LUSC
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.25
p.V394G
DO26540
LUSC
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.25
p.R410L
TCGA-86-A456
LUAD
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.1111
p.R410L
DO24890
LUAD
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.1111
p.P399H
TCGA-92-8063
LUSC
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.7694
p.P399H
DO26941
LUSC
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.7694
p.V411M
TCGA-BS-A0WQ
UCEC
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.0833
p.V411M
DO42705
UCEC
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.0833
p.T398M
TCGA-CK-6747
COAD
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.7423
p.T398M
DO10156
COAD
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.7423
p.S408F
TCGA-DA-A3F8
SKCM
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.1667
p.S408F
DO37418
SKCM
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.1667
p.R410S
TCGA-EE-A3AB
SKCM
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.1111
p.R410S
DO38057
SKCM
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.1111
p.G401C
TCGA-ER-A19P
SKCM
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.6489
p.G401C
DO47623
SKCM
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.6489
p.M404T
TCGA-EY-A1GU
UCEC
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.2778
p.M404T
DO41518
UCEC
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.2778
p.G401S
TCGA-HU-A4GX
STAD
TCGA
LTPNGT
DEG_SCF_FBW7_1
0.5882
p.G401S
DO47757
STAD
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.5882
p.V394I
DO888
BOCA
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.25
p.H406N
DO224987
BRCA
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.2222
p.G388D
DO227522
COCA
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.0833
p.G388V
DO233105
GACA
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.0833
p.G388V
DO232224
PBCA
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.0833
p.R410C
DO233843
GACA
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.1111
p.G407S
DO232067
ORCA
ICGC
LTPNGT
DEG_SCF_FBW7_1
0.1944
Drug responses associated with LRRC4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPNGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NT99
Leucine-rich repeat-containing protein 4B
DEG_SCF_FBW7_1
397:402
LTPNGT
FBXW7
0.9814
More...