DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPNNS
Uniprot ID:
Q8N5R6
Source protein:
Coiled-coil domain-containing protein 33
Source gene:
CCDC33
Class:
DEG_SCF_FBW7_1
Location:
574:579
E3 ligase:
FBXW7
DEGRON score:
0.8312
ASA_SCORE:
75.0833
COIL:
0.8025
CONS_SCORE:
0.3914
DSS_SCORE:
0.5289
HELIX:
0.1588
FCONS_SCORE:
0.872
RIG_SCORE:
0.6919
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q585H
TCGA-17-Z045
LUAD
TCGA
LTPNNS
DEG_SCF_FBW7_1
0.1667
p.R583S
TCGA-77-7463
LUSC
TCGA
LTPNNS
DEG_SCF_FBW7_1
0.2222
p.R583S
DO26716
LUSC
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.2222
p.M564I
TCGA-EE-A29D
SKCM
TCGA
LTPNNS
DEG_SCF_FBW7_1
0.0556
p.M564I
DO38123
SKCM
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.0556
p.R566Q
TCGA-FW-A3R5
SKCM
TCGA
LTPNNS
DEG_SCF_FBW7_1
0.1111
p.R566Q
DO37406
SKCM
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.1111
p.R571G
DO8264
COAD
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.25
p.K588N
DO8264
COAD
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.1944
p.K588N
DO41572
UCEC
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.1944
p.R566W
DO222769
COCA
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.1111
p.R566W
SIDM00217
Colorectal Carcinoma
GDSC
LTPNNS
DEG_SCF_FBW7_1
0.1111
p.R566W
ACH-000999
Colon/Colorectal Cancer
CCLE
LTPNNS
DEG_SCF_FBW7_1
0.1111
p.R566W
SNU-1040
large_intestine
COSMIC
LTPNNS
DEG_SCF_FBW7_1
0.1111
p.A581T
DO220851
MELA
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.2778
p.E568Q
DO232861
NACA
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.1667
p.P583S
DO220073
SARC
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.2222
p.P583S
DO37430
SKCM
ICGC
LTPNNS
DEG_SCF_FBW7_1
0.2222
p.Q573L
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
LTPNNS
DEG_SCF_FBW7_1
0.3056
p.Q573L
ACH-000878
Lung Cancer
CCLE
LTPNNS
DEG_SCF_FBW7_1
0.3056
p.Q573L
HCC-15
lung
COSMIC
LTPNNS
DEG_SCF_FBW7_1
0.3056
p.V567M
SIDM00999
Bladder Carcinoma
GDSC
LTPNNS
DEG_SCF_FBW7_1
0.1389
p.V567M
ACH-000973
Bladder Cancer
CCLE
LTPNNS
DEG_SCF_FBW7_1
0.1389
p.V567M
639-V
urinary_tract
COSMIC
LTPNNS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with CCDC33 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPNNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5R6
Coiled-coil domain-containing protein 33
DEG_SCF_FBW7_1
574:579
LTPNNS
FBXW7
0.8312
More...