DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPPCS
Uniprot ID:
Q9Y5X2
Source protein:
Sorting nexin-8
Source gene:
SNX8
Class:
DEG_SCF_FBW7_1
Location:
451:456
E3 ligase:
FBXW7
DEGRON score:
0.9637
ASA_SCORE:
79.8167
COIL:
0.968
CONS_SCORE:
0.3423
DSS_SCORE:
0.3708
HELIX:
0.0095
FCONS_SCORE:
0.9369
RIG_SCORE:
0.6294
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H448Q
TCGA-DD-A4NK
LIHC
TCGA
LTPPCS
DEG_SCF_FBW7_1
0.25
p.H448Q
DO44882
LIHC
ICGC
LTPPCS
DEG_SCF_FBW7_1
0.25
p.P458L
TCGA-EY-A1GF
UCEC
TCGA
LTPPCS
DEG_SCF_FBW7_1
0.2778
p.P458L
DO41704
UCEC
ICGC
LTPPCS
DEG_SCF_FBW7_1
0.2778
p.P447Q
DO229045
LICA
ICGC
LTPPCS
DEG_SCF_FBW7_1
0.2222
p.P454L
ACH-000294
Leukemia
CCLE
LTPPCS
DEG_SCF_FBW7_1
0.6471
p.L462M
ACH-000969
Colon/Colorectal Cancer
CCLE
LTPPCS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with SNX8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPPCS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5X2
Sorting nexin-8
DEG_SCF_FBW7_1
451:456
LTPPCS
FBXW7
0.9637
More...