DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPPES
Uniprot ID:
Q15652
Source protein:
Probable JmjC domain-containing histone demethylation protein 2C
Source gene:
JMJD1C
Class:
DEG_SCF_FBW7_1
Location:
2000:2005
E3 ligase:
FBXW7
DEGRON score:
0.9985
ASA_SCORE:
73.8
COIL:
0.83
CONS_SCORE:
0.4871
DSS_SCORE:
0.7283
HELIX:
0.1373
FCONS_SCORE:
1.0326
RIG_SCORE:
0.5931
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1991K
TCGA-17-Z061
LUAD
TCGA
LTPPES
DEG_SCF_FBW7_1
0.0833
p.P2002L
TCGA-35-4123
LUAD
TCGA
LTPPES
DEG_SCF_FBW7_1
0.7582
p.E1991D
TCGA-EO-A22R
UCEC
TCGA
LTPPES
DEG_SCF_FBW7_1
0.0833
p.S1995C
DO228278
LICA
ICGC
LTPPES
DEG_SCF_FBW7_1
0.1944
p.K2001T
DO45241
LIRI
ICGC
LTPPES
DEG_SCF_FBW7_1
0.7306
p.D1990N
DO232224
PBCA
ICGC
LTPPES
DEG_SCF_FBW7_1
0.0556
p.S1994R
DO36766
READ
ICGC
LTPPES
DEG_SCF_FBW7_1
0.1667
p.S2007P
SIDM00082
Melanoma
GDSC
LTPPES
DEG_SCF_FBW7_1
0.7222
p.S2007P
ACH-001190
Skin Cancer
CCLE
LTPPES
DEG_SCF_FBW7_1
0.7222
p.S2007P
SK-MEL-2
skin
COSMIC
LTPPES
DEG_SCF_FBW7_1
0.7222
p.Q2006L
SIDM01026
Esophageal Squamous Cell Carcinoma
GDSC
LTPPES
DEG_SCF_FBW7_1
0.3056
p.Q2006L
ACH-000824
Esophageal Cancer
CCLE
LTPPES
DEG_SCF_FBW7_1
0.3056
p.Q2006L
KYSE-510
oesophagus
COSMIC
LTPPES
DEG_SCF_FBW7_1
0.3056
p.D1993V
SIDM00604
Oral Cavity Carcinoma
GDSC
LTPPES
DEG_SCF_FBW7_1
0.1389
p.D1993V
ACH-001542
Head and Neck Cancer
CCLE
LTPPES
DEG_SCF_FBW7_1
0.1389
p.D1993V
KON
upper_aerodigestive_tract
COSMIC
LTPPES
DEG_SCF_FBW7_1
0.1389
Drug responses associated with JMJD1C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPPES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_SCF_FBW7_1
2000:2005
LTPPES
FBXW7
0.9985
More...