DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPPGS
Uniprot ID:
Q494R4
Source protein:
Coiled-coil domain-containing protein 153
Source gene:
CCDC153
Class:
DEG_SCF_FBW7_1
Location:
197:202
E3 ligase:
FBXW7
DEGRON score:
0.8823
ASA_SCORE:
49.0667
COIL:
0.894
CONS_SCORE:
0.4445
DSS_SCORE:
0.7803
HELIX:
0.0725
FCONS_SCORE:
0.9386
RIG_SCORE:
0.588
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L210I
TCGA-A5-A0G2
UCEC
TCGA
LTPPGS
DEG_SCF_FBW7_1
0.1111
p.L210I
DO41235
UCEC
ICGC
LTPPGS
DEG_SCF_FBW7_1
0.1111
p.K189N
TCGA-EE-A3AD
SKCM
TCGA
LTPPGS
DEG_SCF_FBW7_1
0.2222
p.K189N
DO37707
SKCM
ICGC
LTPPGS
DEG_SCF_FBW7_1
0.2222
p.R193C
TCGA-TQ-A7RH
LGG
TCGA
LTPPGS
DEG_SCF_FBW7_1
0.2222
p.R193C
DO219849
LGG
ICGC
LTPPGS
DEG_SCF_FBW7_1
0.2222
p.Q192K
DO228923
LICA
ICGC
LTPPGS
DEG_SCF_FBW7_1
0.1944
p.R193S
DO229008
LICA
ICGC
LTPPGS
DEG_SCF_FBW7_1
0.2222
p.L197V
DO231155
LUSC
ICGC
LTPPGS
DEG_SCF_FBW7_1
0.5654
p.P208L
DO222837
MELA
ICGC
LTPPGS
DEG_SCF_FBW7_1
0.1667
p.T198P
DO48539
PAEN
ICGC
LTPPGS
DEG_SCF_FBW7_1
0.7031
p.P205S
SIDM02015
Colorectal Carcinoma
GDSC
LTPPGS
DEG_SCF_FBW7_1
0.25
p.R193H
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LTPPGS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with CCDC153 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPPGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q494R4
Coiled-coil domain-containing protein 153
DEG_SCF_FBW7_1
197:202
LTPPGS
FBXW7
0.8823
More...