DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPQSS
Uniprot ID:
Q8N1M1
Source protein:
Bestrophin-3
Source gene:
BEST3
Class:
DEG_SCF_FBW7_1
Location:
484:489
E3 ligase:
FBXW7
DEGRON score:
0.9836
ASA_SCORE:
100.1167
COIL:
0.9345
CONS_SCORE:
0.4385
DSS_SCORE:
0.5572
HELIX:
0.0497
FCONS_SCORE:
0.9994
RIG_SCORE:
0.6903
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q487P
TCGA-BR-4280
STAD
TCGA
LTPQSS
DEG_SCF_FBW7_1
0.5924
p.E474D
TCGA-CG-4443
STAD
TCGA
LTPQSS
DEG_SCF_FBW7_1
0.0556
p.L499M
TCGA-IB-7651
PAAD
TCGA
LTPQSS
DEG_SCF_FBW7_1
0.0556
p.P487L
DO1678
BRCA
ICGC
LTPQSS
DEG_SCF_FBW7_1
0.7582
p.P487L
DO40978
UCEC
ICGC
LTPQSS
DEG_SCF_FBW7_1
0.7582
p.P476S
DO41871
UCEC
ICGC
LTPQSS
DEG_SCF_FBW7_1
0.1111
p.K496N
SIDM00683
Prostate Carcinoma
GDSC
LTPQSS
DEG_SCF_FBW7_1
0.25
p.K496N
ACH-000977
lymph_node
CCLE
LTPQSS
DEG_SCF_FBW7_1
0.25
p.K496N
LNCaP-Clone-FGC
prostate
COSMIC
LTPQSS
DEG_SCF_FBW7_1
0.25
p.S488P
ACH-000954
Endometrial/Uterine Cancer
CCLE
LTPQSS
DEG_SCF_FBW7_1
0.5641
p.G488V
CAL-120
breast
COSMIC
LTPQSS
DEG_SCF_FBW7_1
0.7532
p.L486I
HCC2998
large_intestine
COSMIC
LTPQSS
DEG_SCF_FBW7_1
0.7174
p.R483M
HCT-15
large_intestine
COSMIC
LTPQSS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with BEST3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPQSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N1M1
Bestrophin-3
DEG_SCF_FBW7_1
484:489
LTPQSS
FBXW7
0.9836
More...