DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPRLT
Uniprot ID:
Q9C0K0
Source protein:
B-cell lymphoma/leukemia 11B
Source gene:
BCL11B
Class:
DEG_SCF_FBW7_1
Location:
259:264
E3 ligase:
FBXW7
DEGRON score:
0.9403
ASA_SCORE:
88.5
COIL:
0.6873
CONS_SCORE:
0.5189
DSS_SCORE:
0.5487
HELIX:
0.0157
FCONS_SCORE:
1.0869
RIG_SCORE:
0.6826
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P271Q
TCGA-86-8358
LUAD
TCGA
LTPRLT
DEG_SCF_FBW7_1
0.1389
p.T260M
TCGA-AJ-A3BG
UCEC
TCGA
LTPRLT
DEG_SCF_FBW7_1
0.8534
p.T260M
TCGA-CM-6162
COAD
TCGA
LTPRLT
DEG_SCF_FBW7_1
0.8534
p.E262K
DO233261
GACA
ICGC
LTPRLT
DEG_SCF_FBW7_1
0.7022
p.G265W
DO36360
PRAD
ICGC
LTPRLT
DEG_SCF_FBW7_1
0.3056
p.E263K
DO50301
SKCM
ICGC
LTPRLT
DEG_SCF_FBW7_1
0.7022
p.P266A
SIDM00032
Bladder Carcinoma
GDSC
LTPRLT
DEG_SCF_FBW7_1
0.2778
p.P266A
ACH-000839
Bladder Cancer
CCLE
LTPRLT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with BCL11B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPRLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C0K0
B-cell lymphoma/leukemia 11B
DEG_SCF_FBW7_1
259:264
LTPRLT
FBXW7
0.9403
More...