DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPRPS
Uniprot ID:
Q7KZ85
Source protein:
Transcription elongation factor SPT6
Source gene:
SUPT6H
Class:
DEG_SCF_FBW7_1
Location:
1696:1701
E3 ligase:
FBXW7
DEGRON score:
0.9302
ASA_SCORE:
98.6667
COIL:
0.9578
CONS_SCORE:
0.2211
DSS_SCORE:
0.783
HELIX:
0.0162
FCONS_SCORE:
0.9357
RIG_SCORE:
0.5821
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1698H
TCGA-A5-A0G1
UCEC
TCGA
LTPRPS
DEG_SCF_FBW7_1
0.7694
p.P1698H
DO42472
UCEC
ICGC
LTPRPS
DEG_SCF_FBW7_1
0.7694
p.P1710S
TCGA-FR-A726
SKCM
TCGA
LTPRPS
DEG_SCF_FBW7_1
0.0833
p.P1710S
DO48665
SKCM
ICGC
LTPRPS
DEG_SCF_FBW7_1
0.0833
p.R1689Q
TCGA-SS-A7HO
COAD
TCGA
LTPRPS
DEG_SCF_FBW7_1
0.1389
p.R1689Q
DO223705
COAD
ICGC
LTPRPS
DEG_SCF_FBW7_1
0.1389
p.M1711V
DO233270
GACA
ICGC
LTPRPS
DEG_SCF_FBW7_1
0.0556
p.P1700S
SIDM00516
Melanoma
GDSC
LTPRPS
DEG_SCF_FBW7_1
0.5641
p.P1700S
ACH-002166
Skin Cancer
CCLE
LTPRPS
DEG_SCF_FBW7_1
0.5641
p.P1700S
MZ7-mel
skin
COSMIC
LTPRPS
DEG_SCF_FBW7_1
0.5641
Drug responses associated with SUPT6H mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPRPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7KZ85
Transcription elongation factor SPT6
DEG_SCF_FBW7_1
1696:1701
LTPRPS
FBXW7
0.9302
More...