DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPRTS
Uniprot ID:
Q7Z353
Source protein:
Highly divergent homeobox
Source gene:
HDX
Class:
DEG_SCF_FBW7_1
Location:
373:378
E3 ligase:
FBXW7
DEGRON score:
0.9926
ASA_SCORE:
82.4833
COIL:
0.8267
CONS_SCORE:
0.6919
DSS_SCORE:
0.4801
HELIX:
0.0595
FCONS_SCORE:
1.3595
RIG_SCORE:
0.7219
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L373S
TCGA-AA-3968
COAD
TCGA
LTPRTS
DEG_SCF_FBW7_1
0.7667
p.S378L
SIDM00381
Cervical Carcinoma
GDSC
LTPRTS
DEG_SCF_FBW7_1
0.7667
p.S378L
ACH-002020
Cervical Cancer
CCLE
LTPRTS
DEG_SCF_FBW7_1
0.7667
p.S378L
SKG-IIIa
cervix
COSMIC
LTPRTS
DEG_SCF_FBW7_1
0.7667
p.R376L
TCGA-CV-A45W
HNSC
TCGA
LTPRTS
DEG_SCF_FBW7_1
0.7316
p.R376I
DO7801
COAD
ICGC
LTPRTS
DEG_SCF_FBW7_1
0.6991
p.P375S
SIDM00007
Other Solid Cancers
GDSC
LTPRTS
DEG_SCF_FBW7_1
0.6752
p.P375S
ACH-001550
Skin Cancer
CCLE
LTPRTS
DEG_SCF_FBW7_1
0.6752
p.P375S
MCC13
skin
COSMIC
LTPRTS
DEG_SCF_FBW7_1
0.6752
p.G371W
DO38039
SKCM
ICGC
LTPRTS
DEG_SCF_FBW7_1
0.2778
p.R381C
DO42673
UCEC
ICGC
LTPRTS
DEG_SCF_FBW7_1
0.25
p.R369I
TCGA-AP-A0LM
UCEC
TCGA
LTPRTS
DEG_SCF_FBW7_1
0.2222
p.R369I
DO43306
UCEC
ICGC
LTPRTS
DEG_SCF_FBW7_1
0.2222
p.A382S
TCGA-AX-A0J1
UCEC
TCGA
LTPRTS
DEG_SCF_FBW7_1
0.2222
p.V364I
SIDM02015
Colorectal Carcinoma
GDSC
LTPRTS
DEG_SCF_FBW7_1
0.0833
p.R387Q
BALL-1
haematopoietic_and_lymphoid_tissue
COSMIC
LTPRTS
DEG_SCF_FBW7_1
0.0833
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Drug responses associated with HDX mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LTPRTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z353
Highly divergent homeobox
DEG_SCF_FBW7_1
373:378
LTPRTS
FBXW7
0.9926
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