DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPRTT
Uniprot ID:
Q9NQ86
Source protein:
E3 ubiquitin-protein ligase TRIM36
Source gene:
TRIM36
Class:
DEG_SCF_FBW7_1
Location:
106:111
E3 ligase:
FBXW7
DEGRON score:
0.9607
ASA_SCORE:
88.6333
COIL:
0.7998
CONS_SCORE:
0.4099
DSS_SCORE:
0.4196
HELIX:
0.0223
FCONS_SCORE:
0.8633
RIG_SCORE:
0.7322
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N97T
TCGA-AJ-A3EL
UCEC
TCGA
LTPRTT
DEG_SCF_FBW7_1
0.0833
p.N97T
DO41542
UCEC
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.0833
p.F113Y
TCGA-D3-A8GI
SKCM
TCGA
LTPRTT
DEG_SCF_FBW7_1
0.2778
p.F113Y
DO50284
SKCM
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.2778
p.G100V
TCGA-D6-A74Q
HNSC
TCGA
LTPRTT
DEG_SCF_FBW7_1
0.1667
p.P114S
TCGA-DA-A1IC
SKCM
TCGA
LTPRTT
DEG_SCF_FBW7_1
0.25
p.K104Q
DO222762
COCA
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.2778
p.R103H
DO233767
GACA
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.25
p.R103C
DO233885
GACA
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.25
p.T107N
DO229009
LICA
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.8166
p.A97S
DO26414
LUAD
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.0833
p.E103K
DO222818
MELA
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.25
p.R115Q
DO37819
SKCM
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.2222
p.L112I
DO37462
SKCM
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.3056
p.P102S
DO37430
SKCM
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.3333
p.G114D
DO43795
UCEC
ICGC
LTPRTT
DEG_SCF_FBW7_1
0.25
p.L106F
SIDM00534
Colorectal Carcinoma
GDSC
LTPRTT
DEG_SCF_FBW7_1
0.6981
p.L106F
ACH-000986
Colon/Colorectal Cancer
CCLE
LTPRTT
DEG_SCF_FBW7_1
0.6981
p.L106F
HT-115
large_intestine
COSMIC
LTPRTT
DEG_SCF_FBW7_1
0.6981
p.V112A
SIDM00381
Cervical Carcinoma
GDSC
LTPRTT
DEG_SCF_FBW7_1
0.3056
p.V112A
ACH-002020
Cervical Cancer
CCLE
LTPRTT
DEG_SCF_FBW7_1
0.3056
p.V112A
SKG-IIIa
cervix
COSMIC
LTPRTT
DEG_SCF_FBW7_1
0.3056
p.P99S
ACH-000215
Brain Cancer
CCLE
LTPRTT
DEG_SCF_FBW7_1
0.1389
p.N118K
MKN45
stomach
COSMIC
LTPRTT
DEG_SCF_FBW7_1
0.1389
p.V119L
NCI-H209
lung
COSMIC
LTPRTT
DEG_SCF_FBW7_1
0.1111
p.V100A
SKG-IIIa
cervix
COSMIC
LTPRTT
DEG_SCF_FBW7_1
0.1667
p.Q118H
NCI-H209
lung
COSMIC
LTPRTT
DEG_SCF_FBW7_1
0.1389
p.K107T
MFE-319
endometrium
COSMIC
LTPRTT
DEG_SCF_FBW7_1
0.7306
Drug responses associated with TRIM36 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPRTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQ86
E3 ubiquitin-protein ligase TRIM36
DEG_SCF_FBW7_1
106:111
LTPRTT
FBXW7
0.9607
More...