DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPSNT
Uniprot ID:
Q06710
Source protein:
Paired box protein Pax-8
Source gene:
PAX8
Class:
DEG_SCF_FBW7_1
Location:
278:283
E3 ligase:
FBXW7
DEGRON score:
0.9993
ASA_SCORE:
73.6167
COIL:
0.927
CONS_SCORE:
0.6586
DSS_SCORE:
0.5947
HELIX:
0.0352
FCONS_SCORE:
1.0761
RIG_SCORE:
0.6922
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R287H
TCGA-AU-6004
COAD
TCGA
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.R287H
DO7780
COAD
ICGC
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.R287H
ACH-001688
Kidney Cancer
CCLE
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.N282I
TCGA-DK-A6AW
BLCA
TCGA
LTPSNT
DEG_SCF_FBW7_1
0.6169
p.N282I
DO48566
BLCA
ICGC
LTPSNT
DEG_SCF_FBW7_1
0.6169
p.G274R
TCGA-EB-A44P
SKCM
TCGA
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.G274R
DO47525
SKCM
ICGC
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.R287C
TCGA-FI-A2D5
UCEC
TCGA
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.R287C
DO41331
UCEC
ICGC
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.R287C
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.R287C
ACH-001127
Leukemia
CCLE
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.R287C
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
LTPSNT
DEG_SCF_FBW7_1
0.2222
p.D272E
DO229022
LICA
ICGC
LTPSNT
DEG_SCF_FBW7_1
0.1667
p.T283K
DO229041
LICA
ICGC
LTPSNT
DEG_SCF_FBW7_1
0.7306
p.A276D
DO229041
LICA
ICGC
LTPSNT
DEG_SCF_FBW7_1
0.2778
p.A276S
DO229221
THCA
ICGC
LTPSNT
DEG_SCF_FBW7_1
0.2778
p.T283S
SIDM00465
Ovarian Carcinoma
GDSC
LTPSNT
DEG_SCF_FBW7_1
0.6005
p.T283S
ACH-002183
Ovarian Cancer
CCLE
LTPSNT
DEG_SCF_FBW7_1
0.6005
p.T283S
OVMIU
ovary
COSMIC
LTPSNT
DEG_SCF_FBW7_1
0.6005
p.D273N
SIDM01186
Breast Carcinoma
GDSC
LTPSNT
DEG_SCF_FBW7_1
0.1944
p.D273N
SIDM00230
Small Cell Lung Carcinoma
GDSC
LTPSNT
DEG_SCF_FBW7_1
0.1944
p.D273N
ACH-000554
Breast Cancer
CCLE
LTPSNT
DEG_SCF_FBW7_1
0.1944
p.D273N
ACH-002145
Lung Cancer
CCLE
LTPSNT
DEG_SCF_FBW7_1
0.1944
p.D273N
IST-SL2
lung
COSMIC
LTPSNT
DEG_SCF_FBW7_1
0.1944
p.D273N
UACC-893
breast
COSMIC
LTPSNT
DEG_SCF_FBW7_1
0.1944
p.S290W
ACH-000652
Pancreatic Cancer
CCLE
LTPSNT
DEG_SCF_FBW7_1
0.1389
p.L278M
ACH-001719
Ovarian Cancer
CCLE
LTPSNT
DEG_SCF_FBW7_1
0.5999
p.P272R
C-33-A
cervix
COSMIC
LTPSNT
DEG_SCF_FBW7_1
0.1667
p.A281E
NB7
autonomic_ganglia
COSMIC
LTPSNT
DEG_SCF_FBW7_1
0.7701
Drug responses associated with PAX8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPSNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q06710
Paired box protein Pax-8
DEG_SCF_FBW7_1
278:283
LTPSNT
FBXW7
0.9993
More...