DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPSRS
Uniprot ID:
Q9P2Q2
Source protein:
FERM domain-containing protein 4A
Source gene:
FRMD4A
Class:
DEG_SCF_FBW7_1
Location:
896:901
E3 ligase:
FBXW7
DEGRON score:
0.9992
ASA_SCORE:
76.3167
COIL:
0.8538
CONS_SCORE:
0.3862
DSS_SCORE:
0.6806
HELIX:
0.0987
FCONS_SCORE:
0.9982
RIG_SCORE:
0.7227
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P907L
TCGA-CR-5248
HNSC
TCGA
LTPSRS
DEG_SCF_FBW7_1
0.1667
p.P907L
DO14694
HNSC
ICGC
LTPSRS
DEG_SCF_FBW7_1
0.1667
p.G910D
TCGA-MR-A8JO
LIHC
TCGA
LTPSRS
DEG_SCF_FBW7_1
0.0833
p.G910D
DO49714
LIHC
ICGC
LTPSRS
DEG_SCF_FBW7_1
0.0833
p.S899A
DO222461
BTCA
ICGC
LTPSRS
DEG_SCF_FBW7_1
0.6477
p.R905W
SIDM01307
Colorectal Carcinoma
GDSC
LTPSRS
DEG_SCF_FBW7_1
0.2222
p.R911C
SIDM02035
Colorectal Carcinoma
GDSC
LTPSRS
DEG_SCF_FBW7_1
0.0556
p.G888D
SIDM02013
Colorectal Carcinoma
GDSC
LTPSRS
DEG_SCF_FBW7_1
0.1111
p.G888D
SIDM00433
T-Lymphoblastic Leukemia
GDSC
LTPSRS
DEG_SCF_FBW7_1
0.1111
p.G888D
ACH-000795
Leukemia
CCLE
LTPSRS
DEG_SCF_FBW7_1
0.1111
p.G888D
ACH-000997
Colon/Colorectal Cancer
CCLE
LTPSRS
DEG_SCF_FBW7_1
0.1111
p.P898S
SIDM00516
Melanoma
GDSC
LTPSRS
DEG_SCF_FBW7_1
0.6752
p.P898S
SIDM00537
Colorectal Carcinoma
GDSC
LTPSRS
DEG_SCF_FBW7_1
0.6752
p.P898S
ACH-000982
Colon/Colorectal Cancer
CCLE
LTPSRS
DEG_SCF_FBW7_1
0.6752
p.P898S
ACH-001345
Colon/Colorectal Cancer
CCLE
LTPSRS
DEG_SCF_FBW7_1
0.6752
p.P898S
ACH-002166
Skin Cancer
CCLE
LTPSRS
DEG_SCF_FBW7_1
0.6752
p.P898S
MZ7-mel
skin
COSMIC
LTPSRS
DEG_SCF_FBW7_1
0.6752
p.G887D
SIDM01608
Endometrial Carcinoma
GDSC
LTPSRS
DEG_SCF_FBW7_1
0.0833
p.G887D
ACH-000990
Endometrial/Uterine Cancer
CCLE
LTPSRS
DEG_SCF_FBW7_1
0.0833
p.D889G
SIDM01770
Gastric Carcinoma
GDSC
LTPSRS
DEG_SCF_FBW7_1
0.1389
p.D889N
ACH-000149
Neuroblastoma
CCLE
LTPSRS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with FRMD4A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPSRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2Q2
FERM domain-containing protein 4A
DEG_SCF_FBW7_1
896:901
LTPSRS
FBXW7
0.9992
More...