DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPSRT
Uniprot ID:
O15027
Source protein:
Protein transport protein Sec16A
Source gene:
SEC16A
Class:
DEG_SCF_FBW7_1
Location:
2053:2058
E3 ligase:
FBXW7
DEGRON score:
0.9519
ASA_SCORE:
96.3667
COIL:
0.953
CONS_SCORE:
0.2637
DSS_SCORE:
0.6664
HELIX:
0.015
FCONS_SCORE:
0.8974
RIG_SCORE:
0.6532
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2055H
TCGA-2W-A8YY
CESC
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.7694
p.P2055H
TCGA-ER-A19P
SKCM
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.7694
p.P2055H
DO223732
CESC
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.7694
p.P2055H
DO47623
SKCM
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.7694
p.W2068L
TCGA-55-6979
LUAD
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.0556
p.W2068L
DO24110
LUAD
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.0556
p.E2044D
TCGA-AA-3984
COAD
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.0833
p.E2044D
DO9002
COAD
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.0833
p.E2043K
TCGA-BS-A0UV
UCEC
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.0556
p.E2043K
DO42793
UCEC
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.0556
p.E2043K
SIDM02013
Colorectal Carcinoma
GDSC
LTPSRT
DEG_SCF_FBW7_1
0.0556
p.P2066R
TCGA-CN-6019
HNSC
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.1111
p.P2066R
DO14316
HNSC
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.1111
p.K2049Q
TCGA-EY-A1GI
UCEC
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.3333
p.K2049Q
DO41211
UCEC
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.3333
p.A2051T
TCGA-G7-A8LE
KIRP
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.2778
p.A2051T
DO51555
KIRP
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.2778
p.S2056L
TCGA-GN-A266
SKCM
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.7667
p.S2056L
DO37432
SKCM
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.7667
p.F2046C
TCGA-KD-A5QU
SARC
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.1389
p.F2046C
DO223272
SARC
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.1389
p.S2062L
TCGA-S5-AA26
BLCA
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.2222
p.S2062L
DO51904
BLCA
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.2222
p.S2062L
SIDM00973
Melanoma
GDSC
LTPSRT
DEG_SCF_FBW7_1
0.2222
p.S2062L
WM793B
skin
COSMIC
LTPSRT
DEG_SCF_FBW7_1
0.2222
p.P2065L
TCGA-W3-AA1R
SKCM
TCGA
LTPSRT
DEG_SCF_FBW7_1
0.1389
p.P2065L
DO51275
SKCM
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.1389
p.F2046L
DO225032
BRCA
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.1389
p.E2044Q
DO233952
GACA
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.0833
p.E2044Q
SIDM00951
T-Lymphoblastic Leukemia
GDSC
LTPSRT
DEG_SCF_FBW7_1
0.0833
p.E2044Q
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
LTPSRT
DEG_SCF_FBW7_1
0.0833
p.D2061E
DO229028
LICA
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.25
p.P2060Q
DO229034
LICA
ICGC
LTPSRT
DEG_SCF_FBW7_1
0.2778
p.P2065S
SIDM01193
Glioma
GDSC
LTPSRT
DEG_SCF_FBW7_1
0.1389
p.P2065S
SIDM01323
Oral Cavity Carcinoma
GDSC
LTPSRT
DEG_SCF_FBW7_1
0.1389
p.P2065S
U-118-MG
central_nervous_system
COSMIC
LTPSRT
DEG_SCF_FBW7_1
0.1389
p.N2048H
ACH-000165
Non-Cancerous
CCLE
LTPSRT
DEG_SCF_FBW7_1
0.1944
p.T2053I
ACH-002059
Leukemia
CCLE
LTPSRT
DEG_SCF_FBW7_1
0.7078
p.T2053I
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
LTPSRT
DEG_SCF_FBW7_1
0.7078
p.P2052L
ACH-002059
Leukemia
CCLE
LTPSRT
DEG_SCF_FBW7_1
0.3056
p.P2052L
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
LTPSRT
DEG_SCF_FBW7_1
0.3056
p.A2056E
OE33
oesophagus
COSMIC
LTPSRT
DEG_SCF_FBW7_1
0.7701
Drug responses associated with SEC16A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPSRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
DEG_SCF_FBW7_1
2053:2058
LTPSRT
FBXW7
0.9519
More...