DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPTPAPT
Uniprot ID:
O96005
Source protein:
Cleft lip and palate transmembrane protein 1
Source gene:
CLPTM1
Class:
DEG_SCF_FBW7_1
Location:
621:628
E3 ligase:
FBXW7
DEGRON score:
0.9586
ASA_SCORE:
93.0125
COIL:
0.951
CONS_SCORE:
0.1574
DSS_SCORE:
0.7154
HELIX:
0.0159
FCONS_SCORE:
0.8561
RIG_SCORE:
0.6497
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T616I
TCGA-EC-A1QX
UCEC
TCGA
LTPTPAPT
DEG_SCF_FBW7_1
0.6389
p.T622M
TCGA-FD-A3B5
BLCA
TCGA
LTPTPAPT
DEG_SCF_FBW7_1
0.7423
p.V611M
TCGA-XU-A92Q
THYM
TCGA
LTPTPAPT
DEG_SCF_FBW7_1
0.0556
p.T625M
DO224944
BRCA
ICGC
LTPTPAPT
DEG_SCF_FBW7_1
0.7423
p.T615M
DO15639
HNSC
ICGC
LTPTPAPT
DEG_SCF_FBW7_1
0.1667
p.A638T
DO232998
PEME
ICGC
LTPTPAPT
DEG_SCF_FBW7_1
0.0556
p.S637F
DO218850
SKCA
ICGC
LTPTPAPT
DEG_SCF_FBW7_1
0.0833
p.T622R
SIDM00709
Non-Small Cell Lung Carcinoma
GDSC
LTPTPAPT
DEG_SCF_FBW7_1
0.7876
p.T622R
NCI-H2085
lung
COSMIC
LTPTPAPT
DEG_SCF_FBW7_1
0.7876
p.R620K
ACH-001518
Endometrial/Uterine Cancer
CCLE
LTPTPAPT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with CLPTM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPTPAPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O96005
Cleft lip and palate transmembrane protein 1
DEG_SCF_FBW7_1
621:628
LTPTPAPT
FBXW7
0.9586
More...