DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPTPPPS
Uniprot ID:
Q969T3
Source protein:
Sorting nexin-21
Source gene:
SNX21
Class:
DEG_SCF_FBW7_1
Location:
355:362
E3 ligase:
FBXW7
DEGRON score:
0.7335
ASA_SCORE:
69.8625
COIL:
0.9618
CONS_SCORE:
0.4451
DSS_SCORE:
0.486
HELIX:
0.0171
FCONS_SCORE:
0.8984
RIG_SCORE:
0.655
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L350P
DO222874
COCA
ICGC
LTPTPPPS
DEG_SCF_FBW7_1
0.1944
p.E370G
DO232761
PBCA
ICGC
LTPTPPPS
DEG_SCF_FBW7_1
0.1111
p.L367F
SIDM00282
Colorectal Carcinoma
GDSC
LTPTPPPS
DEG_SCF_FBW7_1
0.1944
p.L367F
CW-2
large_intestine
COSMIC
LTPTPPPS
DEG_SCF_FBW7_1
0.1944
p.R346Q
SIDM00539
Esophageal Carcinoma
GDSC
LTPTPPPS
DEG_SCF_FBW7_1
0.0833
p.P359T
SIDM01029
Esophageal Squamous Cell Carcinoma
GDSC
LTPTPPPS
DEG_SCF_FBW7_1
0.7031
p.P359T
KYSE-270
oesophagus
COSMIC
LTPTPPPS
DEG_SCF_FBW7_1
0.7031
p.P350T
ACH-000873
Esophageal Cancer
CCLE
LTPTPPPS
DEG_SCF_FBW7_1
0.1944
p.P350T
KYSE-270
oesophagus
COSMIC
LTPTPPPS
DEG_SCF_FBW7_1
0.1944
p.L358F
ACH-000998
Colon/Colorectal Cancer
CCLE
LTPTPPPS
DEG_SCF_FBW7_1
0.6981
p.L358F
CW-2
large_intestine
COSMIC
LTPTPPPS
DEG_SCF_FBW7_1
0.6981
Drug responses associated with SNX21 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q969T3
Sorting nexin-21
DEG_SCF_FBW7_1
355:362
LTPTPPPS
FBXW7
0.7335
More...