DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPVES
Uniprot ID:
Q8N9W8
Source protein:
Golgi associated RAB2 interactor protein 2
Source gene:
GARIN2
Class:
DEG_SCF_FBW7_1
Location:
351:356
E3 ligase:
FBXW7
DEGRON score:
0.85
ASA_SCORE:
67.5833
COIL:
0.5222
CONS_SCORE:
0.7541
DSS_SCORE:
0.5048
HELIX:
0.1363
FCONS_SCORE:
1.1652
RIG_SCORE:
0.7606
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R345T
TCGA-73-4659
LUAD
TCGA
LTPVES
DEG_SCF_FBW7_1
0.1667
p.D366N
TCGA-FR-A726
SKCM
TCGA
LTPVES
DEG_SCF_FBW7_1
0.0556
p.Q348K
TCGA-KQ-A41N
BLCA
TCGA
LTPVES
DEG_SCF_FBW7_1
0.25
p.E363K
TCGA-LN-A49Y
ESCA
TCGA
LTPVES
DEG_SCF_FBW7_1
0.1389
Drug responses associated with GARIN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPVES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N9W8
Golgi associated RAB2 interactor protein 2
DEG_SCF_FBW7_1
351:356
LTPVES
FBXW7
0.85
More...