DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPVGT
Uniprot ID:
Q96QU1
Source protein:
Protocadherin-15
Source gene:
PCDH15
Class:
DEG_SCF_FBW7_1
Location:
159:164
E3 ligase:
FBXW7
DEGRON score:
0.9694
ASA_SCORE:
55.8833
COIL:
0.9333
CONS_SCORE:
1
DSS_SCORE:
0.2747
HELIX:
0.01
FCONS_SCORE:
1.1362
RIG_SCORE:
0.7965
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P161T
TCGA-77-8009
LUSC
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.7031
p.T155I
TCGA-94-A4VJ
LUSC
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.2222
p.T165I
TCGA-A5-A0G1
UCEC
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.3056
p.F170Y
TCGA-AG-A002
READ
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.1667
p.V156M
TCGA-BK-A0C9
UCEC
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.25
p.V156M
DO41253
UCEC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.25
p.G169E
TCGA-D3-A8GL
SKCM
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.1944
p.G169E
TCGA-W3-AA1V
SKCM
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.1944
p.G169R
TCGA-DA-A95Y
SKCM
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.1944
p.Y152H
TCGA-DI-A1BU
UCEC
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.1389
p.G163D
TCGA-EB-A3XF
SKCM
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.6087
p.G163D
DO37437
SKCM
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.6087
p.G163C
TCGA-LN-A49Y
ESCA
TCGA
LTPVGT
DEG_SCF_FBW7_1
0.6489
p.T173K
DO225012
BRCA
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.0833
p.T160A
DO8264
COAD
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.7139
p.V156A
DO230311
COCA
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.25
p.I171T
DO233762
GACA
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.1389
p.H154N
DO229029
LICA
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.1944
p.T151S
DO25416
LUAD
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.1111
p.G168C
DO224566
LUSC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.2222
p.G168C
DO231007
LUSC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.2222
p.G168V
DO224566
LUSC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.2222
p.G168V
DO231007
LUSC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.2222
p.T160I
DO50104
LUSC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.7078
p.P166T
DO27200
LUSC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.2778
p.G174E
DO222843
MELA
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.0556
p.G174E
DO50287
SKCM
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.0556
p.G174E
DO51276
SKCM
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.0556
p.P150H
DO37643
SKCM
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.0833
p.P150H
DO37405
SKCM
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.0833
p.G174R
DO223908
SKCM
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.0556
p.Y157H
DO42023
UCEC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.2778
p.T170I
DO42472
UCEC
ICGC
LTPVGT
DEG_SCF_FBW7_1
0.1667
p.N162S
SIDM00277
Acute Myeloid Leukemia
GDSC
LTPVGT
DEG_SCF_FBW7_1
0.7069
p.N162S
EoL-1-cell
haematopoietic_and_lymphoid_tissue
COSMIC
LTPVGT
DEG_SCF_FBW7_1
0.7069
p.N157S
ACH-000198
Leukemia
CCLE
LTPVGT
DEG_SCF_FBW7_1
0.2778
p.N157S
EoL-1-cell
haematopoietic_and_lymphoid_tissue
COSMIC
LTPVGT
DEG_SCF_FBW7_1
0.2778
p.F170C
ACH-000987
Skin Cancer
CCLE
LTPVGT
DEG_SCF_FBW7_1
0.1667
p.F170C
Mewo
skin
COSMIC
LTPVGT
DEG_SCF_FBW7_1
0.1667
p.T172K
HPAF-II
pancreas
COSMIC
LTPVGT
DEG_SCF_FBW7_1
0.1111
p.T172K
NCI-H1975
lung
COSMIC
LTPVGT
DEG_SCF_FBW7_1
0.1111
p.I165K
EN
endometrium
COSMIC
LTPVGT
DEG_SCF_FBW7_1
0.3056
p.Y167N
HCC-366
lung
COSMIC
LTPVGT
DEG_SCF_FBW7_1
0.25
Drug responses associated with PCDH15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPVGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96QU1
Protocadherin-15
DEG_SCF_FBW7_1
159:164
LTPVGT
FBXW7
0.9694
More...