DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPVKT
Uniprot ID:
Q96L50
Source protein:
Leucine-rich repeat protein 1
Source gene:
LRR1
Class:
DEG_SCF_FBW7_1
Location:
123:128
E3 ligase:
FBXW7
DEGRON score:
0.6648
ASA_SCORE:
75.3167
COIL:
0.7825
CONS_SCORE:
0.6696
DSS_SCORE:
0.302
HELIX:
0.1133
FCONS_SCORE:
0.9887
RIG_SCORE:
0.7972
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T128S
TCGA-AP-A1E0
UCEC
TCGA
LTPVKT
DEG_SCF_FBW7_1
0.7116
p.T128S
DO43154
UCEC
ICGC
LTPVKT
DEG_SCF_FBW7_1
0.7116
p.C114S
TCGA-DD-A4NK
LIHC
TCGA
LTPVKT
DEG_SCF_FBW7_1
0.0833
p.C114S
DO44882
LIHC
ICGC
LTPVKT
DEG_SCF_FBW7_1
0.0833
p.H127R
DO233784
GACA
ICGC
LTPVKT
DEG_SCF_FBW7_1
0.8244
p.C117F
DO48471
KIRP
ICGC
LTPVKT
DEG_SCF_FBW7_1
0.1667
p.C114F
DO228986
LICA
ICGC
LTPVKT
DEG_SCF_FBW7_1
0.0833
p.K120N
DO23580
LUAD
ICGC
LTPVKT
DEG_SCF_FBW7_1
0.25
p.H127Y
DO222843
MELA
ICGC
LTPVKT
DEG_SCF_FBW7_1
0.7229
p.C138R
DO219468
SKCM
ICGC
LTPVKT
DEG_SCF_FBW7_1
0.0556
p.V126A
SIDM02039
Colorectal Carcinoma
GDSC
LTPVKT
DEG_SCF_FBW7_1
0.5825
p.T136A
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
LTPVKT
DEG_SCF_FBW7_1
0.5556
p.T136A
SIDM01664
Prostate Carcinoma
GDSC
LTPVKT
DEG_SCF_FBW7_1
0.5556
p.P125S
SIDM00282
Colorectal Carcinoma
GDSC
LTPVKT
DEG_SCF_FBW7_1
0.6752
p.P125S
ACH-000998
Colon/Colorectal Cancer
CCLE
LTPVKT
DEG_SCF_FBW7_1
0.6752
p.P125S
CW-2
large_intestine
COSMIC
LTPVKT
DEG_SCF_FBW7_1
0.6752
p.K135E
SIDM01025
Esophageal Squamous Cell Carcinoma
GDSC
LTPVKT
DEG_SCF_FBW7_1
0.5833
p.K135E
ACH-000637
Esophageal Cancer
CCLE
LTPVKT
DEG_SCF_FBW7_1
0.5833
p.K135E
KYSE-520
oesophagus
COSMIC
LTPVKT
DEG_SCF_FBW7_1
0.5833
Drug responses associated with LRR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPVKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96L50
Leucine-rich repeat protein 1
DEG_SCF_FBW7_1
123:128
LTPVKT
FBXW7
0.6648
More...