DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPVSE
Uniprot ID:
Q8IUR6
Source protein:
CREB3 regulatory factor
Source gene:
CREBRF
Class:
DEG_SCF_FBW7_2
Location:
512:517
E3 ligase:
FBXW7
DEGRON score:
0.6536
ASA_SCORE:
66.6333
COIL:
0.729
CONS_SCORE:
0.7107
DSS_SCORE:
0.3533
HELIX:
0.2073
FCONS_SCORE:
0.9744
RIG_SCORE:
0.7637
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V515F
TCGA-AG-A002
READ
TCGA
LTPVSE
DEG_SCF_FBW7_2
0.5957
p.K507N
TCGA-AO-A0JC
BRCA
TCGA
LTPVSE
DEG_SCF_FBW7_2
0.3056
p.R503L
TCGA-EE-A2GK
SKCM
TCGA
LTPVSE
DEG_SCF_FBW7_2
0.0833
p.R503W
TCGA-EE-A2GO
SKCM
TCGA
LTPVSE
DEG_SCF_FBW7_2
0.0833
p.K509N
DO5277
BRCA
ICGC
LTPVSE
DEG_SCF_FBW7_2
0.25
p.S526P
DO229363
BTCA
ICGC
LTPVSE
DEG_SCF_FBW7_2
0.0833
p.S518R
DO228087
EOPC
ICGC
LTPVSE
DEG_SCF_FBW7_2
0.3056
p.E519D
DO228948
LICA
ICGC
LTPVSE
DEG_SCF_FBW7_2
0.2778
p.P514S
DO220886
MELA
ICGC
LTPVSE
DEG_SCF_FBW7_2
0.6752
p.R505W
DO37823
SKCM
ICGC
LTPVSE
DEG_SCF_FBW7_2
0.1389
p.R505L
DO37738
SKCM
ICGC
LTPVSE
DEG_SCF_FBW7_2
0.1389
p.N506K
SIDM00181
Bladder Carcinoma
GDSC
LTPVSE
DEG_SCF_FBW7_2
0.1667
p.N506K
SIDM01646
Non-Cancerous
GDSC
LTPVSE
DEG_SCF_FBW7_2
0.1667
p.N506K
ACH-002358
Non-Cancerous
CCLE
LTPVSE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with CREBRF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPVSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IUR6
CREB3 regulatory factor
DEG_SCF_FBW7_2
512:517
LTPVSE
FBXW7
0.6536
More...