DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPYND
Uniprot ID:
Q9ULL1
Source protein:
Pleckstrin homology domain-containing family G member 1
Source gene:
PLEKHG1
Class:
LIG_APCC_ABBA_1
Location:
1344:1349
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9991
ASA_SCORE:
78.9
COIL:
0.8762
CONS_SCORE:
0.2959
DSS_SCORE:
0.392
HELIX:
0.0693
FCONS_SCORE:
0.9913
RIG_SCORE:
0.738
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1344M
TCGA-04-1649
OV
TCGA
LTPYND
LIG_APCC_ABBA_1
0.5999
p.L1344M
DO32467
OV
ICGC
LTPYND
LIG_APCC_ABBA_1
0.5999
p.N1348T
TCGA-F5-6814
READ
TCGA
LTPYND
LIG_APCC_ABBA_1
0.5944
p.N1348T
DO36556
READ
ICGC
LTPYND
LIG_APCC_ABBA_1
0.5944
p.G1339C
DO229036
LICA
ICGC
LTPYND
LIG_APCC_ABBA_1
0.1944
p.L1357H
TCGA-22-1005
LUSC
TCGA
LTPYND
LIG_APCC_ABBA_1
0.1111
p.L1357H
DO26632
LUSC
ICGC
LTPYND
LIG_APCC_ABBA_1
0.1111
p.L1357R
TCGA-DD-A1EE
LIHC
TCGA
LTPYND
LIG_APCC_ABBA_1
0.1111
p.L1357R
TCGA-EP-A26S
LIHC
TCGA
LTPYND
LIG_APCC_ABBA_1
0.1111
p.L1357R
DO22857
LIHC
ICGC
LTPYND
LIG_APCC_ABBA_1
0.1111
p.L1357R
DO22854
LIHC
ICGC
LTPYND
LIG_APCC_ABBA_1
0.1111
p.V1334D
TCGA-56-A62T
LUSC
TCGA
LTPYND
LIG_APCC_ABBA_1
0.0556
p.V1334D
TCGA-UF-A7JT
HNSC
TCGA
LTPYND
LIG_APCC_ABBA_1
0.0556
p.V1334D
DO219090
HNSC
ICGC
LTPYND
LIG_APCC_ABBA_1
0.0556
p.V1334D
DO219144
LUSC
ICGC
LTPYND
LIG_APCC_ABBA_1
0.0556
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Drug responses associated with PLEKHG1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LTPYND
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULL1
Pleckstrin homology domain-containing family G member 1
LIG_APCC_ABBA_1
1344:1349
LTPYND
APC,CDC20,FZR1
0.9991
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