DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTRTPIVT
Uniprot ID:
Q9GZL7
Source protein:
Ribosome biogenesis protein WDR12
Source gene:
WDR12
Class:
DEG_SCF_FBW7_1
Location:
245:252
E3 ligase:
FBXW7
DEGRON score:
0.5835
ASA_SCORE:
69.6125
COIL:
0.4733
CONS_SCORE:
0.6869
DSS_SCORE:
0.4755
HELIX:
0.0487
FCONS_SCORE:
0.9664
RIG_SCORE:
0.789
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L253V
TCGA-A6-5659
COAD
TCGA
LTRTPIVT
DEG_SCF_FBW7_1
0.3056
p.L253V
DO9860
COAD
ICGC
LTRTPIVT
DEG_SCF_FBW7_1
0.3056
p.T240K
DO228986
LICA
ICGC
LTRTPIVT
DEG_SCF_FBW7_1
0.1944
p.R247M
DO229211
THCA
ICGC
LTRTPIVT
DEG_SCF_FBW7_1
0.7521
p.V251G
SIDM00924
Other Solid Cancers
GDSC
LTRTPIVT
DEG_SCF_FBW7_1
0.6421
p.V251G
ACH-000867
Lung Cancer
CCLE
LTRTPIVT
DEG_SCF_FBW7_1
0.6421
p.V251G
ChaGo-K-1
lung
COSMIC
LTRTPIVT
DEG_SCF_FBW7_1
0.6421
Drug responses associated with WDR12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTRTPIVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9GZL7
Ribosome biogenesis protein WDR12
DEG_SCF_FBW7_1
245:252
LTRTPIVT
FBXW7
0.5835
More...