DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTTPFTS
Uniprot ID:
Q9Y4B4
Source protein:
Helicase ARIP4
Source gene:
RAD54L2
Class:
DEG_SCF_FBW7_1
Location:
1305:1311
E3 ligase:
FBXW7
DEGRON score:
0.9655
ASA_SCORE:
69.8143
COIL:
0.859
CONS_SCORE:
0.292
DSS_SCORE:
0.4115
HELIX:
0.0877
FCONS_SCORE:
0.9695
RIG_SCORE:
0.7655
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1314W
TCGA-BF-A1Q0
SKCM
TCGA
LTTPFTS
DEG_SCF_FBW7_1
0.25
p.G1314W
DO47374
SKCM
ICGC
LTTPFTS
DEG_SCF_FBW7_1
0.25
p.V1299I
TCGA-DF-A2KU
UCEC
TCGA
LTTPFTS
DEG_SCF_FBW7_1
0.1667
p.V1299I
DO35206
PACA
ICGC
LTTPFTS
DEG_SCF_FBW7_1
0.1667
p.V1299I
DO223286
UCEC
ICGC
LTTPFTS
DEG_SCF_FBW7_1
0.1667
p.V1299I
SIDM00850
Gastric Carcinoma
GDSC
LTTPFTS
DEG_SCF_FBW7_1
0.1667
p.V1299I
ACH-000880
Gastric Cancer
CCLE
LTTPFTS
DEG_SCF_FBW7_1
0.1667
p.V1299I
AGS
stomach
COSMIC
LTTPFTS
DEG_SCF_FBW7_1
0.1667
p.M1296I
DO48384
BLCA
ICGC
LTTPFTS
DEG_SCF_FBW7_1
0.0833
p.A1313S
DO229028
LICA
ICGC
LTTPFTS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with RAD54L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTTPFTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y4B4
Helicase ARIP4
DEG_SCF_FBW7_1
1305:1311
LTTPFTS
FBXW7
0.9655
More...